----JOB [amyg.576828] START [Thu Jan 11 09:33:36 EST 2018] on HOST [blade26.dhe.duke.edu]----
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#@# Hippocampal Subfields processing (T1) left Thu Jan 11 09:33:47 EST 2018
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Setting up environment variables
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LD_LIBRARY_PATH is .:/usr/local/packages/freesurfer_dev/MCRv80//runtime/glnxa64:/usr/local/packages/freesurfer_dev/MCRv80//bin/glnxa64:/usr/local/packages/freesurfer_dev/MCRv80//sys/os/glnxa64:/usr/local/packages/freesurfer_dev/MCRv80//sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/usr/local/packages/freesurfer_dev/MCRv80//sys/java/jre/glnxa64/jre/lib/amd64/server:/usr/local/packages/freesurfer_dev/MCRv80//sys/java/jre/glnxa64/jre/lib/amd64/client:/usr/local/packages/freesurfer_dev/MCRv80//sys/java/jre/glnxa64/jre/lib/amd64:/usr/lib64/qt5/plugins/platforms:
/usr/local/packages/freesurfer_dev/bin/segmentSubjectT1_autoEstimateAlveusML: error while loading shared libraries: libmwlaunchermain.so: cannot open shared object file: No such file or directory
@#@FSTIME  2018:01:11:09:33:48 run_segmentSubjectT1_autoEstimateAlveusML.sh N 13 e 1.11 S 0.14 U 0.00 P 12% M 1528 F 2 R 2419 W 0 c 56 w 8822 I 3984 O 0 L 0.00 0.01 0.05
@#@FSLOADPOST 2018:01:11:09:33:49 run_segmentSubjectT1_autoEstimateAlveusML.sh N 13 0.00 0.01 0.05
#--------------------------------------------
#@# Hippocampal Subfields processing (T1) right Thu Jan 11 09:33:49 EST 2018
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Setting up environment variables
---
LD_LIBRARY_PATH is .:/usr/local/packages/freesurfer_dev/MCRv80//runtime/glnxa64:/usr/local/packages/freesurfer_dev/MCRv80//bin/glnxa64:/usr/local/packages/freesurfer_dev/MCRv80//sys/os/glnxa64:/usr/local/packages/freesurfer_dev/MCRv80//sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/usr/local/packages/freesurfer_dev/MCRv80//sys/java/jre/glnxa64/jre/lib/amd64/server:/usr/local/packages/freesurfer_dev/MCRv80//sys/java/jre/glnxa64/jre/lib/amd64/client:/usr/local/packages/freesurfer_dev/MCRv80//sys/java/jre/glnxa64/jre/lib/amd64:/usr/lib64/qt5/plugins/platforms:
/usr/local/packages/freesurfer_dev/bin/segmentSubjectT1_autoEstimateAlveusML: error while loading shared libraries: libmwlaunchermain.so: cannot open shared object file: No such file or directory
@#@FSTIME  2018:01:11:09:33:50 run_segmentSubjectT1_autoEstimateAlveusML.sh N 13 e 1.02 S 0.12 U 0.01 P 13% M 1528 F 0 R 2418 W 0 c 21 w 8799 I 0 O 0 L 0.00 0.01 0.05
@#@FSLOADPOST 2018:01:11:09:33:51 run_segmentSubjectT1_autoEstimateAlveusML.sh N 13 0.08 0.03 0.05
 
All done!
 
If you have used results from this software for a publication, please cite:
 
Iglesias, J.E., Augustinack, J.C., Nguyen, K., Player, C.M., Player, A., Wright,
M., Roy, N., Frosch, M.P., McKee, A.C., Wald, L.L., Fischl, B., and Van Leemput, K.,
A computational atlas of the hippocampal formation using ex vivo, ultra-high resolution
MRI: Application to adaptive segmentation of in vivo MRI.  Neuroimage 115, 2015, 117-137.
http://dx.doi.org/10.1016/j.neuroimage.2015.04.042
 
In addition, if you have used the segmentation of the nuclei of the amygdala, please also cite:

Saygin, Z.M. & Kliemann, D. (joint 1st authors), Iglesias, J.E., van der Kouwe, A.J.W.,
Boyd, E., Reuter, M., Stevens, A., Van Leemput, K., McKee, A., Frosch, M.P., Fischl, B.,
and Augustinack, J.C., High-resolution magnetic resonance imaging reveals nuclei of the
human amygdala: manual segmentation to automatic atlas. Neuroimage 155, 2017, 370-382.
http://doi.org/10.1016/j.neuroimage.2017.04.046