%------------ FreeSurfer FAST ------------------------%
fsfasthome = getenv('FSFAST_HOME');
fsfasttoolbox = sprintf('%s/toolbox',fsfasthome);
if (exist(fsfasttoolbox) == 7)
path(path,fsfasttoolbox);
end
clear fsfasthome fsfasttoolbox;
%-----------------------------------------------------%
Is there a way check to see if the path is set correctly?
Hello,I am trying to work through the FS-FAST tutorial on my data. I amusing OSX 10.6.8 with Freesurfer v. 5.1 When I get to the makecontrast command which I run' mkcontrast-sess -analysis test -contrast pain-v-rest -a 1 -c 0 '
I get the following output error:" phhp-jcraggs-mb:Project aoshea$ mkcontrast-sess -analysis test-contrast pain-v-rest -a 1 -c 0INFO: Found 1 Non-Null ConditionsINFO: Found 1 DelaysCondition Weights: 1.00000000000000000000mkcontrast -anadir test -wcond 1.00000000000000000000 -sumconds -otest/pain-v-rest.mat -wdelay 1 -no-octave$Id: mkcontrast,v 1.10 2010/07/16 16:20:10 greve Exp $cmtxfile test/pain-v-rest.matnconds 1, wcond 1.00000000000000000000ndelays 1, wdelay 1ndelays 1, wpsasumconds 1sumdelays 0nircorr 0TER 0.050000rdeltartauERROR running mkcontrastmkcontrast -anadir test -wcond 1.00000000000000000000 -sumconds -otest/pain-v-rest.mat -wdelay 1 -no-octaveMon Jul 1 08:51:02 EDT 2013"
It is not creating a .mat file in the analysis directory. Anysuggestions would be greatly appreciated. Thanks!-Andrew
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