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Hello FreeSurfer Developers,

I would like to know if it is correct to perform volume and surface area analysis using freesurfer's GLM!?

In several mailing list questions I have already seen instructions for performing these types of analysis. But I understand that freesurfer does vertex-wise analysis in the 2D surface space. So, it is not clear to me how it is possible to evaluate a 3D measurement, as volume, with a 2D method!?

I've also read that surface area analysis via vertex-wise analysis doesn't make much sense. The best would be to do ROI-based analysis. Can you explain that to me?

Thanks in advance!

Laura Willers de Souza 

Master Student in Biochemistry

Zimmer Lab - Federal University of Rio Grande do Sul 

Porto Alegre/RS - Brazil