On Mon, Nov 13, 2017 at 5:15 PM, Douglas N Greve <greve@nmr.mgh.harvard.edu> wrote:

you can use anything that you can register the the FS anatomical

On 11/13/2017 04:34 PM, lanbo Wang wrote:
> Can I use data processed by other tool like FSL, or I can only use DTI
> image after Freesurfer processing?
>
> On Fri, Nov 10, 2017 at 3:07 PM, Douglas Greve
> <greve@nmr.mgh.harvard.edu <mailto:greve@nmr.mgh.harvard.edu>> wrote:
>
> Yes
>
>
> On 11/10/17 2:45 PM, lanbo Wang wrote:
>> Thank you very much, it's work.
>> I have another question, this is for structural imaging. Can I
>> use those steps for fmri or DTI imaging?
>>
>> On Fri, Nov 10, 2017 at 1:08 PM, Douglas Greve
>> <greve@nmr.mgh.harvard.edu <mailto:greve@nmr.mgh.harvard.edu>> wrote:
>>
>> Don't use --conjunct, just mri_concat file1 file2 ... file N
>> --o output
>>
>>
>> On 11/10/17 12:56 PM, lanbo Wang wrote:
>>> I firstly did mris_preproc separately. Secondly used fscalc
>>> to reverse left symptom subjects. Thirdly used mri_concat
>>> --conjunct to combine all the subjects together.
>>>
>>> The code is:
>>> 1.mris_preproc --target fsaverage_sym --hemi lh \
>>>    --xhemi --paired-diff \
>>>    --srcsurfreg fsaverage_sym.sphere.reg \
>>>    --meas thickness \
>>>    --out lh.lh-rh.thickness.sm00.s02.mg
>>> <http://lh.lh-rh.thickness.sm00.s02.mg>h \
>>>    --s subj_02_1
>>> 2. fscalc lh.lh-rh.thickness.sm00.s09.mg
>>> <http://lh.lh-rh.thickness.sm00.s09.mg>h mul -1 -o
>>> lh.lh-rh.thickness.sm00.s09.mg
>>> <http://lh.lh-rh.thickness.sm00.s09.mg>h
>>> 3.mri_concat --conjunct --i lh.lh-rh.thickness.sm00.s02.mg
>>> <http://lh.lh-rh.thickness.sm00.s02.mg>h
>>> lh.lh-rh.thickness.sm00.s03.mg
>>> <http://lh.lh-rh.thickness.sm00.s03.mg>h
>>> lh.lh-rh.thickness.sm00.s04.mg
>>> <http://lh.lh-rh.thickness.sm00.s04.mg>h
>>> lh.lh-rh.thickness.sm00.s05.mg
>>> <http://lh.lh-rh.thickness.sm00.s05.mg>h
>>> lh.lh-rh.thickness.sm00.s06.mg
>>> <http://lh.lh-rh.thickness.sm00.s06.mg>h
>>> lh.lh-rh.thickness.sm00.s08.mg
>>> <http://lh.lh-rh.thickness.sm00.s08.mg>h
>>> lh.lh-rh.thickness.sm00.s09.mg
>>> <http://lh.lh-rh.thickness.sm00.s09.mg>h
>>> lh.lh-rh.thickness.sm00.s10.mg
>>> <http://lh.lh-rh.thickness.sm00.s10.mg>h
>>> lh.lh-rh.thickness.sm00.s11.mg
>>> <http://lh.lh-rh.thickness.sm00.s11.mg>h
>>> lh.lh-rh.thickness.sm00.s12.mg
>>> <http://lh.lh-rh.thickness.sm00.s12.mg>h
>>> lh.lh-rh.thickness.sm00.s13.mg
>>> <http://lh.lh-rh.thickness.sm00.s13.mg>h
>>> lh.lh-rh.thickness.sm00.s14.mg
>>> <http://lh.lh-rh.thickness.sm00.s14.mg>h
>>> lh.lh-rh.thickness.sm00.s15.mg
>>> <http://lh.lh-rh.thickness.sm00.s15.mg>h
>>> lh.lh-rh.thickness.sm00.s16.mg
>>> <http://lh.lh-rh.thickness.sm00.s16.mg>h
>>> lh.lh-rh.thickness.sm00.s17.mg
>>> <http://lh.lh-rh.thickness.sm00.s17.mg>h
>>> lh.lh-rh.thickness.sm00.s18.mg
>>> <http://lh.lh-rh.thickness.sm00.s18.mg>h
>>> lh.lh-rh.thickness.sm00.s19.mg
>>> <http://lh.lh-rh.thickness.sm00.s19.mg>h
>>> lh.lh-rh.thickness.sm00.s20.mg
>>> <http://lh.lh-rh.thickness.sm00.s20.mg>h
>>> lh.lh-rh.thickness.sm00.s21.mg
>>> <http://lh.lh-rh.thickness.sm00.s21.mg>h
>>> lh.lh-rh.thickness.sm00.s22.mg
>>> <http://lh.lh-rh.thickness.sm00.s22.mg>h
>>> lh.lh-rh.thickness.sm00.s24.mg
>>> <http://lh.lh-rh.thickness.sm00.s24.mg>h
>>> lh.lh-rh.thickness.sm00.s25.mg
>>> <http://lh.lh-rh.thickness.sm00.s25.mg>h
>>> lh.lh-rh.thickness.sm00.s26.mg
>>> <http://lh.lh-rh.thickness.sm00.s26.mg>h
>>> lh.lh-rh.thickness.sm00.s27.mg
>>> <http://lh.lh-rh.thickness.sm00.s27.mg>h
>>> lh.lh-rh.thickness.sm00.s29.mg
>>> <http://lh.lh-rh.thickness.sm00.s29.mg>h
>>> lh.lh-rh.thickness.sm00.s32.mg
>>> <http://lh.lh-rh.thickness.sm00.s32.mg>h --o
>>> lh.lh-rh.thickness.sm00.mgh
>>> 4.smooth
>>> 5.mri_glmfit --y lh.lh-rh.thickness.sm10.mgh --glmdir
>>> glm.lh.lh-rh.thickness.sm10 --osgm --surf fsaverage_sym lh
>>>
>>>
>>> On Fri, Nov 10, 2017 at 11:17 AM, Douglas Greve
>>> <greve@nmr.mgh.harvard.edu

>>> <mailto:greve@nmr.mgh.harvard.edu>> wrote:
>>>
>>> Do you only have one subject in your input file? You
>>> need to run mris_preproc separately for each subject,
>>> create a different file for each, then mri_concat the
>>> files together
>>>
>>>
>>> On 11/9/17 6:20 PM, lanbo Wang wrote:
>>>> Dr. Douglas,
>>>>
>>>> I try #3 method, when I run mri_glmfit, get error.
>>>> The code I used:
>>>> [mtobia@localhost lh.lh-rh.thickness]$ mri_glmfit --y
>>>> lh.lh-rh.thickness.sm10.mgh --glmdir
>>>> glm.lh.lh-rh.thickness.sm10 --osgm --surf fsaverage_sym lh
>>>> Reading source surface
>>>> /HD4/subjects_results_symptom//fsaverage_sym/surf/lh.white
>>>> Number of vertices 163842
>>>> Number of faces 327680
>>>> Total area 61972.710938
>>>> AvgVtxArea 0.378247
>>>> AvgVtxDist 0.693419
>>>> StdVtxDist 0.190498
>>>>
>>>> $Id: mri_glmfit.c,v 1.196.2.8 2012/11/01 18:51:41 greve
>>>> Exp $
>>>> cwd /HD4/subjects_results_symptom/lh.lh-rh.thickness
>>>> cmdline mri_glmfit --y lh.lh-rh.thickness.sm10.mgh
>>>> --glmdir glm.lh.lh-rh.thickness.sm10 --osgm --surf
>>>> fsaverage_sym lh
>>>> sysname Linux
>>>> hostname localhost.localdomain
>>>> machine x86_64
>>>> user     mtobia
>>>> FixVertexAreaFlag = 1
>>>> UseMaskWithSmoothing     1
>>>> OneSampleGroupMean 1
>>>> y
>>>> /HD4/subjects_results_symptom/lh.lh-rh.thickness/lh.lh-rh.th

>>>> <http://lh.lh-rh.th>ickness.sm10.mgh
>>>> logyflag 0
>>>> usedti 0
>>>> labelmask
>>>> /HD4/subjects_results_symptom//fsaverage_sym/label/lh.cortex.label
>>>> maskinv 0
>>>> glmdir glm.lh.lh-rh.thickness.sm10
>>>> IllCondOK 0
>>>> ReScaleX 1
>>>> DoFFx 0
>>>> Creating output directory glm.lh.lh-rh.thickness.sm10
>>>> Loading y from
>>>> /HD4/subjects_results_symptom/lh.lh-rh.thickness/lh.lh-rh.th
>>>> <http://lh.lh-rh.th>ickness.sm10.mgh
>>>> Saving design matrix to glm.lh.lh-rh.thickness.sm10/Xg.dat
>>>> Normalized matrix condition is 1
>>>> Matrix condition is 1
>>>> Found 146902 points in label.
>>>> Pruning voxels by thr: 0.000000
>>>> Found 146902 voxels in mask
>>>> Saving mask to glm.lh.lh-rh.thickness.sm10/mask.mgh
>>>> Reshaping mriglm->mask...
>>>> search space = 79288.081914
>>>> DOF = 0
>>>> ERROR: DOF = 0
>>>>
>>>> The code I used before this one is
>>>> How can I resolve this problem.
>>>>
>>>> Thanks,
>>>> Lanbo
>>>>
>>>>
>>>> On Tue, Nov 7, 2017 at 6:10 PM, Douglas N Greve
>>>> <greve@nmr.mgh.harvard.edu
>>>> <mailto:greve@nmr.mgh.harvard.edu>> wrote:
>>>>
>>>> which code. I gave 3 options below, which one did
>>>> you use?
>>>>
>>>>
>>>> On 11/07/2017 02:43 PM, lanbo Wang wrote:
>>>> > I try to use this code to compare left and right
>>>> hemisphere by paired
>>>> > t-test and add age as covariate.
>>>> >
>>>> > Thanks,
>>>> > Lanbo
>>>> >
>>>> > On Tue, Nov 7, 2017 at 11:40 AM, Douglas N Greve
>>>> > <greve@nmr.mgh.harvard.edu
>>>> <mailto:greve@nmr.mgh.harvard.edu>
>>>> <mailto:greve@nmr.mgh.harvard.edu
>>>> <mailto:greve@nmr.mgh.harvard.edu>>> wrote:
>>>> >
>>>> > which method are you trying to implement? If
>>>> #3, then you need to run
>>>> > mris_preproc separately for each subject, and
>>>> then run that fscalc
>>>> > command
>>>> >
>>>> >
>>>> > On 11/07/2017 11:33 AM, lanbo Wang wrote:
>>>> > > Hi Douglas,
>>>> > >
>>>> > > Thanks for your reply.
>>>> > > I created the fsgd file as you show me, and
>>>> run code like this. Am I
>>>> > > right?
>>>> > > 1.
>>>> > > mris_preproc --fsgd Subject.xhemi.dat \
>>>> > > --target fsaverage_sym --hemi lh \
>>>> > > --xhemi --paired-diff \
>>>> > > --srcsurfreg fsaverage_sym.sphere.reg \
>>>> > > --meas thickness \
>>>> > > --out lh.lh-rh.thickness.age.sm00.mg
>>>> <http://lh.lh-rh.thickness.age.sm00.mg>h \
>>>> > > --s subj_02_1 --s subj_04_1 --s
>>>> subj_05_1 --s subj_06_1 --s
>>>> > > subj_08_1 --s subj_09_1 --s subj_10_1 --s
>>>> subj_11_1 --s
>>>> > subj_12_1
>>>> > > --s subj_13_1 --s subj_14_1 --s subj_15_1
>>>> --s subj_16_1 --s
>>>> > > subj_17_1 --s subj_18_1 --s subj_20_1 --s
>>>> subj_21_1 --s
>>>> > subj_22_1
>>>> > > --s subj_24_1 --s subj_25_1 --s subj_26_1
>>>> --s subj_27_1 --s
>>>> > > subj_29_1 --s subj_32_1
>>>> > >
>>>> > > 2.
>>>> > > mri_glmfit --y
>>>> lh.lh-rh.thickness.age.sm10.mg
>>>> <http://lh.lh-rh.thickness.age.sm10.mg>h --glmdir

>>>> > > glm.lh.lh-rh.thickness.age.sm10 \
>>>> > > --fsgd Subject.xhemi.dat \
>>>> > > --C Avg-thickness-age-Cor.mtx \
>>>> > > --surf fsaverage_sym lh
>>>> > >
>>>> > > Attachment is fsgd and
>>>> Avg-thickness-age-cor.mtx.
>>>> > >
>>>> > > All best,
>>>> > > Lanbo Wang
>>>> > >
>>>> > >
>>>> > > On Tue, Nov 7, 2017 at 10:18 AM, Bruce Fischl
>>>> > > <fischl@nmr.mgh.harvard.edu
>>>> <mailto:fischl@nmr.mgh.harvard.edu>
>>>> <mailto:fischl@nmr.mgh.harvard.edu
>>>> <mailto:fischl@nmr.mgh.harvard.edu>>
>>>> > <mailto:fischl@nmr.mgh.harvard.edu
>>>> <mailto:fischl@nmr.mgh.harvard.edu>
>>>> >   <mailto:fischl@nmr.mgh.harvard.edu
>>>> <mailto:fischl@nmr.mgh.harvard.edu>>>> wrote:
>>>> > >
>>>> > > Hi Danny
>>>> > >
>>>> > > you need to give us more information if
>>>> you want us to help you.
>>>> > > Please include the command you ran and the
>>>> entire screen output.
>>>> > >
>>>> > > cheers
>>>> > > Bruce
>>>> > >
>>>> > >
>>>> > > On Tue, 7 Nov 2017, Danny Deng wrote:
>>>> > >
>>>> > > Dear FDs,
>>>> > > I encountered an odd situation:
>>>> > >
>>>> > > My free surfer will always shut down
>>>> when I run command.
>>>> > >
>>>> > > My MacOS version is 10.12.6 (16G29)
>>>> processor: 1.6 GHz Intel
>>>> > > Core i5
>>>> > >
>>>> > > I don’t know if the compatibility is
>>>> fine with my download
>>>> > > version (MacOS Lion OS X 10.7 (64b
>>>> > > intel)Stable v6.0.0)
>>>> > >
>>>> > > Please kindly suggest.
>>>> > >
>>>> > > Thanks ver much
>>>> > >
>>>> > > Best Regards,Danny Deng
>>>> > >
>>>> > >
>>>> > >    On Nov 7, 2017, at 7:14 AM,
>>>> Douglas N Greve
>>>> > > <greve@nmr.mgh.harvard.edu
>>>> <mailto:greve@nmr.mgh.harvard.edu>
>>>> > <mailto:greve@nmr.mgh.harvard.edu
>>>> <mailto:greve@nmr.mgh.harvard.edu>>
>>>> > <mailto:greve@nmr.mgh.harvard.edu
>>>> <mailto:greve@nmr.mgh.harvard.edu>
>>>> <mailto:greve@nmr.mgh.harvard.edu
>>>> <mailto:greve@nmr.mgh.harvard.edu>>>>
>>>> > > wrote:
>>>> > >
>>>> > >
>>>> > >
>>>> > > On 11/06/2017 12:03 PM, lanbo Wang
>>>> wrote:
>>>> > > Dear experts,
>>>> > >
>>>> > >    I have two questions about
>>>> hemisphere analysis:
>>>> > >
>>>> > > 1) When I run left-right hemisphere paired
>>>> t-test,
>>>> > can I
>>>> > > add age as
>>>> > > covariate? If use fsgd to add covariate, to
>>>> this
>>>> > paired
>>>> > > t-test
>>>> > > analysis, how to make the fsgd table?
>>>> > >
>>>> > > use this one-group, one-covariate
>>>> example
>>>> > >
>>>> https://surfer.nmr.mgh.harvard.edu/fswiki/Fsgdf1G1V
>>>> <https://surfer.nmr.mgh.harvard.edu/fswiki/Fsgdf1G1V>
>>>> >
>>>>   <https://surfer.nmr.mgh.harvard.edu/fswiki/Fsgdf1G1V
>>>> <https://surfer.nmr.mgh.harvard.edu/fswiki/Fsgdf1G1V>>
>>>> > >
>>>>   <https://surfer.nmr.mgh.harvard.edu/fswiki/Fsgdf1G1V
>>>> <https://surfer.nmr.mgh.harvard.edu/fswiki/Fsgdf1G1V>
>>>> >
>>>>   <https://surfer.nmr.mgh.harvard.edu/fswiki/Fsgdf1G1V
>>>> <https://surfer.nmr.mgh.harvard.edu/fswiki/Fsgdf1G1V>>>
>>>> > > 2) I want to reorganize the hemisphere from
>>>> > left-right to
>>>> > > symptom-nosymptom according to body symptom
>>>> side
>>>> > record
>>>> > > and compare
>>>> > > different between symptom hemisphere and
>>>> nosymptom
>>>> > > hemisphere. Can I
>>>> > > use freesurfer to do it?
>>>> > >
>>>> > > Yes, though it is a little tricky
>>>> with multiple ways, each
>>>> > > complicated
>>>> > > in its own way.
>>>> > > 1. Create your own design matrix.
>>>> You can use the one
>>>> > created by
>>>> > > mri_glmfit to start. Assuming you want
>>>> > > symptomHemi-nosymptomHemi, then,
>>>> > > in each subject whose symptomHemi is
>>>> rh, multiply its
>>>> > line in
>>>> > > the design
>>>> > > matrix by -1. Then pass this design
>>>> matrix to mri_glmfit
>>>> > with --X
>>>> > > instead of passing an FSGD file.
>>>> > > 2. Load the output of mris_preproc
>>>> into matlab, eg, y =
>>>> > > MRIread('y.mgh');, then change the sign as
>>>> in #1 above, eg,
>>>> > > y.vol(:,:,:,10) = -y.vol(:,:,:,10); and so
>>>> on for each
>>>> > applicable
>>>> > > subject. Then save the data with
>>>> MRIwrite(y,'new.y.mgh');,
>>>> > > then run
>>>> > > mri_glmfit as normal with the new file.
>>>> > > 3. Run mris_preproc for each subject
>>>> separately to
>>>> > generate an
>>>> > > lh.lh-rh.thickness.sm00.subject10.mgh
>>>> file. Then change the
>>>> > > sign as in
>>>> > > #1 above with
>>>> > > fscalc
>>>> lh.lh-rh.thickness.sm00.subject10.mgh mul -1 -o
>>>> > > lh.lh-rh.thickness.sm00.subject10.mgh
>>>> > > Then run mri_concat to concatenate
>>>> all the subjects together
>>>> > > in the same
>>>> > > order as they are listed in the FSGD
>>>> file, then use this
>>>> > stack
>>>> > > as input
>>>> > > the mri_glmfit
>>>> > >
>>>> > >
>>>> > > Thanks for your patient and help.
>>>> > >
>>>> > > All best,
>>>> > > Lanbo Wang
>>>> > >
>>>> > >
>>>> > > _______________________________________________
>>>> > > Freesurfer mailing list
>>>> > > Freesurfer@nmr.mgh.harvard.edu
>>>> <mailto:Freesurfer@nmr.mgh.harvard.edu>
>>>> > <mailto:Freesurfer@nmr.mgh.harvard.edu
>>>> <mailto:Freesurfer@nmr.mgh.harvard.edu>>
>>>> > > <mailto:Freesurfer@nmr.mgh.harvard.edu
>>>> <mailto:Freesurfer@nmr.mgh.harvard.edu>
>>>> >   <mailto:Freesurfer@nmr.mgh.harvard.edu
>>>> <mailto:Freesurfer@nmr.mgh.harvard.edu>>>
>>>> > >
>>>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>>>> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>
>>>> >
>>>>   <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>>>> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>>
>>>> > >
>>>>   <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>>>> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>
>>>> >
>>>>   <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>>>> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>>>
>>>> > >
>>>> > >
>>>> > > --
>>>> > > Douglas N. Greve, Ph.D.
>>>> > > MGH-NMR Center
>>>> > > greve@nmr.mgh.harvard.edu
>>>> <mailto:greve@nmr.mgh.harvard.edu>
>>>> <mailto:greve@nmr.mgh.harvard.edu
>>>> <mailto:greve@nmr.mgh.harvard.edu>>
>>>> > <mailto:greve@nmr.mgh.harvard.edu
>>>> <mailto:greve@nmr.mgh.harvard.edu>
>>>> <mailto:greve@nmr.mgh.harvard.edu
>>>> <mailto:greve@nmr.mgh.harvard.edu>>>
>>>> >   > Phone Number: 617-724-2358 <tel:617-724-2358>
>>>> <tel:617-724-2358 <tel:617-724-2358>>
>>>> > <tel:617-724-2358 <tel:617-724-2358>
>>>> <tel:617-724-2358 <tel:617-724-2358>>>
>>>> > > Fax: 617-726-7422 <tel:617-726-7422>
>>>> <tel:617-726-7422 <tel:617-726-7422>>
>>>> <tel:617-726-7422 <tel:617-726-7422>

>>>> >   <tel:617-726-7422 <tel:617-726-7422>>>

>>>> > >
>>>> > > Bugs:
>>>> surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
>>>> <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting>
>>>> >
>>>>   <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
>>>> <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting>>
>>>> > >
>>>>   <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
>>>> <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting>
>>>> >   <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
>>>> <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting>>>
>>>> > > FileDrop:
>>>> https://gate.nmr.mgh.harvard.edu/filedrop2
>>>> <https://gate.nmr.mgh.harvard.edu/filedrop2>
>>>> > <https://gate.nmr.mgh.harvard.edu/filedrop2
>>>> <https://gate.nmr.mgh.harvard.edu/filedrop2>>
>>>> > >
>>>>   <https://gate.nmr.mgh.harvard.edu/filedrop2
>>>> <https://gate.nmr.mgh.harvard.edu/filedrop2>
>>>> > <https://gate.nmr.mgh.harvard.edu/filedrop2
>>>> <https://gate.nmr.mgh.harvard.edu/filedrop2>>>
>>>> > >
>>>> www.nmr.mgh.harvard.edu/facility/filedrop/index.html
>>>> <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html>
>>>> >
>>>>   <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html
>>>> <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html>>
>>>> > >
>>>> >
>>>>    <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html
>>>> <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html>
>>>> >   <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html
>>>> <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html>>>
>>>> > > Outgoing:
>>>> > >
>>>> ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
>>>> <ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/>
>>>> >
>>>>   <ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
>>>> <ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/>>
>>>> > >
>>>>   <ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
>>>> <ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/>
>>>> >
>>>>   <ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
>>>> <ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/>>>
>>>> > >
>>>> > >
>>>>   _______________________________________________
>>>> > > Freesurfer mailing list
>>>> > > Freesurfer@nmr.mgh.harvard.edu
>>>> <mailto:Freesurfer@nmr.mgh.harvard.edu>
>>>> > <mailto:Freesurfer@nmr.mgh.harvard.edu
>>>> <mailto:Freesurfer@nmr.mgh.harvard.edu>>

>>>> > > <mailto:Freesurfer@nmr.mgh.harvard.edu
>>>> <mailto:Freesurfer@nmr.mgh.harvard.edu>
>>>> >   <mailto:Freesurfer@nmr.mgh.harvard.edu
>>>> <mailto:Freesurfer@nmr.mgh.harvard.edu>>>
>>>> > >
>>>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>>>> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>
>>>> >
>>>>   <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>>>> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>>
>>>> > >

>>>>   <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>>>> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>
>>>> >
>>>>   <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>>>> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>>>
>>>> > >
>>>> > >
>>>> > > The information in this e-mail is
>>>> intended only for the
>>>> > person
>>>> > > to whom it is
>>>> > > addressed. If you believe this e-mail
>>>> was sent to you in
>>>> > error
>>>> > > and the e-mail
>>>> > > contains patient information, please
>>>> contact the Partners
>>>> > > Compliance HelpLine at
>>>> > > http://www.partners.org/complianceline
>>>> <http://www.partners.org/complianceline>
>>>> > <http://www.partners.org/complianceline
>>>> <http://www.partners.org/complianceline>>
>>>> > >
>>>>   <http://www.partners.org/complianceline
>>>> <http://www.partners.org/complianceline>
>>>> > <http://www.partners.org/complianceline
>>>> <http://www.partners.org/complianceline>>> . If the
>>>> e-mail was
>>>> > > sent to you in error
>>>> > > but does not contain patient
>>>> information, please contact the
>>>> > > sender and properly
>>>> > > dispose of the e-mail.
>>>> > >
>>>> > >
>>>> > >
>>>> > >
>>>> > >
>>>>   _______________________________________________
>>>> > > Freesurfer mailing list
>>>> > > Freesurfer@nmr.mgh.harvard.edu
>>>> <mailto:Freesurfer@nmr.mgh.harvard.edu>
>>>> > <mailto:Freesurfer@nmr.mgh.harvard.edu
>>>> <mailto:Freesurfer@nmr.mgh.harvard.edu>>

>>>> > <mailto:Freesurfer@nmr.mgh.harvard.edu
>>>> <mailto:Freesurfer@nmr.mgh.harvard.edu>
>>>> > <mailto:Freesurfer@nmr.mgh.harvard.edu
>>>> <mailto:Freesurfer@nmr.mgh.harvard.edu>>>
>>>> > >
>>>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>>>> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>
>>>> >
>>>>   <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>>>> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>>
>>>> > >
>>>> >

>>>>    <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>>>> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>
>>>> >
>>>>   <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>>>> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>>>
>>>> > >
>>>> > >
>>>> > > The information in this e-mail is
>>>> intended only for the
>>>> > person to
>>>> > > whom it is
>>>> > > addressed. If you believe this e-mail
>>>> was sent to you in
>>>> > error and
>>>> > > the e-mail
>>>> > > contains patient information, please
>>>> contact the Partners
>>>> > > Compliance HelpLine at
>>>> > > http://www.partners.org/complianceline
>>>> <http://www.partners.org/complianceline>
>>>> > <http://www.partners.org/complianceline
>>>> <http://www.partners.org/complianceline>>
>>>> > > <http://www.partners.org/complianceline
>>>> <http://www.partners.org/complianceline>
>>>> > <http://www.partners.org/complianceline
>>>> <http://www.partners.org/complianceline>>> . If the
>>>> e-mail was sent
>>>> > > to you in error
>>>> > > but does not contain patient
>>>> information, please contact the
>>>> > > sender and properly
>>>> > > dispose of the e-mail.
>>>> > >
>>>> > >
>>>> > >
>>>> > >
>>>> > > _______________________________________________
>>>> > > Freesurfer mailing list
>>>> > > Freesurfer@nmr.mgh.harvard.edu
>>>> <mailto:Freesurfer@nmr.mgh.harvard.edu>
>>>> > <mailto:Freesurfer@nmr.mgh.harvard.edu
>>>> <mailto:Freesurfer@nmr.mgh.harvard.edu>>
>>>> > >
>>>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>>>> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>
>>>> >
>>>>   <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>>>> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>>
>>>> >
>>>> > --
>>>> > Douglas N. Greve, Ph.D.
>>>> > MGH-NMR Center
>>>> > greve@nmr.mgh.harvard.edu
>>>> <mailto:greve@nmr.mgh.harvard.edu>
>>>> <mailto:greve@nmr.mgh.harvard.edu
>>>> <mailto:greve@nmr.mgh.harvard.edu>>
>>>> > Phone Number: 617-724-2358 <tel:617-724-2358>
>>>> <tel:617-724-2358 <tel:617-724-2358>>
>>>> > Fax: 617-726-7422 <tel:617-726-7422>
>>>> <tel:617-726-7422 <tel:617-726-7422>>
>>>> >
>>>> > Bugs:
>>>> surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
>>>> <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting>
>>>> >
>>>>   <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
>>>> <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting>>
>>>> > FileDrop:
>>>> https://gate.nmr.mgh.harvard.edu/filedrop2
>>>> <https://gate.nmr.mgh.harvard.edu/filedrop2>
>>>> > <https://gate.nmr.mgh.harvard.edu/filedrop2
>>>> <https://gate.nmr.mgh.harvard.edu/filedrop2>>
>>>> >
>>>> www.nmr.mgh.harvard.edu/facility/filedrop/index.html
>>>> <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html>
>>>> >
>>>>   <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html
>>>> <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html>>
>>>> > Outgoing:
>>>> >
>>>> ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
>>>> <ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/>
>>>> >
>>>>   <ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
>>>> <ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/>>
>>>> >
>>>> > _______________________________________________
>>>> > Freesurfer mailing list
>>>> > Freesurfer@nmr.mgh.harvard.edu
>>>> <mailto:Freesurfer@nmr.mgh.harvard.edu>
>>>> <mailto:Freesurfer@nmr.mgh.harvard.edu
>>>> <mailto:Freesurfer@nmr.mgh.harvard.edu>>
>>>> >
>>>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>>>> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>
>>>> >
>>>>   <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>>>> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>>
>>>> >
>>>> >
>>>> >
>>>> >

>>>> > _______________________________________________
>>>> > Freesurfer mailing list
>>>> > Freesurfer@nmr.mgh.harvard.edu
>>>> <mailto:Freesurfer@nmr.mgh.harvard.edu>
>>>> >
>>>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>>>> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>
>>>>
>>>> --
>>>> Douglas N. Greve, Ph.D.
>>>> MGH-NMR Center
>>>> greve@nmr.mgh.harvard.edu
>>>> <mailto:greve@nmr.mgh.harvard.edu>
>>>> Phone Number: 617-724-2358 <tel:%28617%29%20724-2358>
>>>> Fax: 617-726-7422 <tel:%28617%29%20726-7422>

>>>>
>>>> Bugs:
>>>> surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
>>>> <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting>
>>>> FileDrop:
>>>> https://gate.nmr.mgh.harvard.edu/filedrop2
>>>> <https://gate.nmr.mgh.harvard.edu/filedrop2>
>>>> www.nmr.mgh.harvard.edu/facility/filedrop/index.html
>>>> <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html>
>>>> Outgoing:
>>>> ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
>>>> <ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/>
>>>>
>>>> _______________________________________________
>>>> Freesurfer mailing list
>>>> Freesurfer@nmr.mgh.harvard.edu
>>>> <mailto:Freesurfer@nmr.mgh.harvard.edu>
>>>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>>>> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>
>>>>
>>>>
>>>>
>>>>
>>>> _______________________________________________
>>>> Freesurfer mailing list
>>>> Freesurfer@nmr.mgh.harvard.edu
>>>> <mailto:Freesurfer@nmr.mgh.harvard.edu>
>>>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>>>> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>
>>>
>>>
>>> _______________________________________________
>>> Freesurfer mailing list
>>> Freesurfer@nmr.mgh.harvard.edu

>>> <mailto:Freesurfer@nmr.mgh.harvard.edu>
>>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>>> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>
>>>
>>>
>>> The information in this e-mail is intended only for the
>>> person to whom it is
>>> addressed. If you believe this e-mail was sent to you in
>>> error and the e-mail
>>> contains patient information, please contact the
>>> Partners Compliance HelpLine at
>>> http://www.partners.org/complianceline
>>> <http://www.partners.org/complianceline> . If the e-mail
>>> was sent to you in error
>>> but does not contain patient information, please contact
>>> the sender and properly
>>> dispose of the e-mail.
>>>
>>>
>>>
>>>
>>> _______________________________________________
>>> Freesurfer mailing list
>>> Freesurfer@nmr.mgh.harvard.edu
>>> <mailto:Freesurfer@nmr.mgh.harvard.edu>
>>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>>> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>
>>
>>
>> _______________________________________________
>> Freesurfer mailing list
>> Freesurfer@nmr.mgh.harvard.edu
>> <mailto:Freesurfer@nmr.mgh.harvard.edu>
>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>
>>
>>
>> The information in this e-mail is intended only for the
>> person to whom it is
>> addressed. If you believe this e-mail was sent to you in
>> error and the e-mail
>> contains patient information, please contact the Partners
>> Compliance HelpLine at
>> http://www.partners.org/complianceline
>> <http://www.partners.org/complianceline> . If the e-mail was
>> sent to you in error
>> but does not contain patient information, please contact the
>> sender and properly
>> dispose of the e-mail.
>>
>>
>>
>>
>> _______________________________________________
>> Freesurfer mailing list
>> Freesurfer@nmr.mgh.harvard.edu
>> <mailto:Freesurfer@nmr.mgh.harvard.edu>
>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>
>
>
> _______________________________________________
> Freesurfer mailing list
> Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>
> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>
>
>
> The information in this e-mail is intended only for the person to
> whom it is
> addressed. If you believe this e-mail was sent to you in error and
> the e-mail
> contains patient information, please contact the Partners
> Compliance HelpLine at
> http://www.partners.org/complianceline
> <http://www.partners.org/complianceline> . If the e-mail was sent
> to you in error
> but does not contain patient information, please contact the
> sender and properly
> dispose of the e-mail.
>
>
>
>
> _______________________________________________
> Freesurfer mailing list
> Freesurfer@nmr.mgh.harvard.edu
> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

--
Douglas N. Greve, Ph.D.
MGH-NMR Center
greve@nmr.mgh.harvard.edu
Phone Number: 617-724-2358
Fax: 617-726-7422

Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2
www.nmr.mgh.harvard.edu/facility/filedrop/index.html
Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/

_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer