Hi Daniele,
do you think you could send us the subject? norm.mgz, wmparc.mgz and aseg.mgz should be enough.
Also, have you experienced this problem with other subjects?
Cheers,
Eugenio
Juan Eugenio Iglesias
Postdoctoral researcher BCBL
www.jeiglesias.com
www.bcbl.eu
Legal disclaimer/Aviso legal/Lege-oharra: www.bcbl.eu/legal-disclaimer
From: "Daniele Orlandi" <daniele.orlandi.psy@gmail.com>
To: "Freesurfer support list" <freesurfer@nmr.mgh.harvard.edu>
Sent: Wednesday, November 18, 2015 10:20:10 AM
Subject: [Freesurfer] -hippocampal-subfields-T1
dear all,
I'm running analysis with the new FS-v6.0 using the flag -hippocampal-subfields-T1 and I get the following error:
none
Matrix:
-3.00003 0 0
0 0 -3.00003
0 3.00003 0
Offset: [-34.0783, 128.423, -71.9905]
Center: [0, 0, 0]
Translation: [-34.0783, 128.423, -71.9905]
Inverse:
-0.33333 0 0
0 0 0.33333
0 -0.33333 0
Singular: 0
I am WriteImage and I'm running!
Wrote image to file asmr2.mgz
This file does not contain MRI parameters
Error using zeros
NaN and Inf not allowed.
Error in segmentSubjectT1_autoEstimateAlveusML (line 1396)
MATLAB:nonaninf
How I can solve it?
Best,
Daniele
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