/usr/csbmb/pkg/FREESURFER/freesurfer/bin/Darwin/mris_flatten  -w 0 -distances  12 20 /usr/people/kdesimon/fs_subjects/gg/surf/rh.full.3d /usr/people/kdesimon/fs_subjects/gg/surf/rh.full.flat
using write iterations = 0
sampling 20 neighbors out to a distance of 12 mm
reading original vertex positions...
minimizing metric distortion induced by projection...
tol=2.0e-01, host=node4, nav=1024, nbrs=2, l_area=1.000, l_dist=1.000
using quadratic fit line minimization

000: dt: 0.00, sse: 0.0 (nan, nan, nan), neg: 0 (%nan:%nan), avgs: 1024
001: dt: 0.00, sse: 0.0 (nan, nan, nan), neg: 0 (%nan:%nan), avgs: 1024
002: dt: 0.00, sse: 0.0 (nan, nan, nan), neg: 0 (%nan:%nan), avgs: 256
003: dt: 0.00, sse: 0.0 (nan, nan, nan), neg: 0 (%nan:%nan), avgs: 64
004: dt: 0.00, sse: 0.0 (nan, nan, nan), neg: 0 (%nan:%nan), avgs: 16
005: dt: 0.00, sse: 0.0 (nan, nan, nan), neg: 0 (%nan:%nan), avgs: 4
006: dt: 0.00, sse: 0.0 (nan, nan, nan), neg: 0 (%nan:%nan), avgs: 1
007: dt: 0.00, sse: 0.0 (nan, nan, nan), neg: 0 (%nan:%nan), avgs: 0
tol=2.0e-01, host=node4, nav=1024, nbrs=2, l_area=1.000, l_dist=0.100
using quadratic fit line minimization

008: dt: 0.00, sse: 0.0 (nan, nan, nan), neg: 0 (%nan:%nan), avgs: 1024
009: dt: 0.00, sse: 0.0 (nan, nan, nan), neg: 0 (%nan:%nan), avgs: 256
010: dt: 0.00, sse: 0.0 (nan, nan, nan), neg: 0 (%nan:%nan), avgs: 64
vertex spacing nan +- nan (1000.00-->-1.00) (max @ vno 0 --> 0)
face area nan +- nan (1000.00-->-1.00)
011: dt: 0.00, sse: 0.0 (nan, nan, nan), neg: 0 (%nan:%nan), avgs: 16
012: dt: 0.00, sse: 0.0 (nan, nan, nan), neg: 0 (%nan:%nan), avgs: 4
013: dt: 0.00, sse: 0.0 (nan, nan, nan), neg: 0 (%nan:%nan), avgs: 1
014: dt: 0.00, sse: 0.0 (nan, nan, nan), neg: 0 (%nan:%nan), avgs: 0
tol=2.0e-01, host=node4, nav=1024, nbrs=2, l_area=1.000, l_dist=1.000
using quadratic fit line minimization

015: dt: 0.00, sse: 0.0 (nan, nan, nan), neg: 0 (%nan:%nan), avgs: 1024
016: dt: 0.00, sse: 0.0 (nan, nan, nan), neg: 0 (%nan:%nan), avgs: 256
017: dt: 0.00, sse: 0.0 (nan, nan, nan), neg: 0 (%nan:%nan), avgs: 64
018: dt: 0.00, sse: 0.0 (nan, nan, nan), neg: 0 (%nan:%nan), avgs: 16
019: dt: 0.00, sse: 0.0 (nan, nan, nan), neg: 0 (%nan:%nan), avgs: 4
020: dt: 0.00, sse: 0.0 (nan, nan, nan), neg: 0 (%nan:%nan), avgs: 1
vertex spacing nan +- nan (1000.00-->-1.00) (max @ vno 0 --> 0)
face area nan +- nan (1000.00-->-1.00)
021: dt: 0.00, sse: 0.0 (nan, nan, nan), neg: 0 (%nan:%nan), avgs: 0
tol=2.0e-01, host=node4, nav=1024, nbrs=2, l_area=0.100, l_dist=1.000
using quadratic fit line minimization

022: dt: 0.00, sse: 0.0 (nan, nan, nan), neg: 0 (%nan:%nan), avgs: 1024
023: dt: 0.00, sse: 0.0 (nan, nan, nan), neg: 0 (%nan:%nan), avgs: 256
024: dt: 0.00, sse: 0.0 (nan, nan, nan), neg: 0 (%nan:%nan), avgs: 64
025: dt: 0.00, sse: 0.0 (nan, nan, nan), neg: 0 (%nan:%nan), avgs: 16
026: dt: 0.00, sse: 0.0 (nan, nan, nan), neg: 0 (%nan:%nan), avgs: 4
027: dt: 0.00, sse: 0.0 (nan, nan, nan), neg: 0 (%nan:%nan), avgs: 1
028: dt: 0.00, sse: 0.0 (nan, nan, nan), neg: 0 (%nan:%nan), avgs: 0
029: dt: 0.00, sse: 0.0 (nan, nan, nan), neg: 0 (%nan:%nan), avgs: 32
030: dt: 0.00, sse: 0.0 (nan, nan, nan), neg: 0 (%nan:%nan), avgs: 8
vertex spacing nan +- nan (1000.00-->-1.00) (max @ vno 0 --> 0)
face area nan +- nan (1000.00-->-1.00)
031: dt: 0.00, sse: 0.0 (nan, nan, nan), neg: 0 (%nan:%nan), avgs: 2
032: dt: 0.00, sse: 0.0 (nan, nan, nan), neg: 0 (%nan:%nan), avgs: 0
033: dt: 0.50, sse: 0.0 (nan, nan, nan), neg: 0 (%nan:%nan), avgs: 0
033: dt: 0.00, sse: 0.0 (nan, nan, nan), neg: 0 (%nan:%nan), avgs: 0
writing flattened patch to /usr/people/kdesimon/fs_subjects/gg/surf/rh.full.flat
reading patch /usr/people/kdesimon/fs_subjects/gg/surf/rh.full.3d with -413 vertices (-0.3% of total)
removing ripped vertices and faces...
flatten: avg p = {nan, nan, nan}
flatten: sum n = {0.00, 0.00, 0.00}
flatten: norm n = {nan, nan, nan}
flatten: transformed n = {nan, nan, nan}
3: 20 | 4: 20 | 5: 20 | 6: 20 | 7: 20 | 8: 20 | 9: 20 | 10: 20 | 11: 20 | 12: 20 | 
resampling long-range distancesarea/dist = 100.000
integrating with navgs=1024 and tol=5.002e-01
integrating with navgs=256 and tol=2.505e-01
integrating with navgs=64 and tol=1.260e-01
integrating with navgs=16 and tol=6.442e-02
integrating with navgs=4 and tol=3.494e-02
integrating with navgs=1 and tol=2.210e-02
integrating with navgs=0 and tol=1.562e-02
pass 1: epoch 1 of 3 starting distance error %nan
area/dist = 10.000
integrating with navgs=1024 and tol=2.001e-01
integrating with navgs=256 and tol=1.002e-01
integrating with navgs=64 and tol=5.039e-02
integrating with navgs=16 and tol=2.577e-02
integrating with navgs=4 and tol=1.398e-02
integrating with navgs=1 and tol=8.839e-03
integrating with navgs=0 and tol=6.250e-03
pass 1: epoch 2 of 3 starting distance error %nan
area/dist = 1.000
integrating with navgs=1024 and tol=2.001e-01
integrating with navgs=256 and tol=1.002e-01
integrating with navgs=64 and tol=5.039e-02
integrating with navgs=16 and tol=2.577e-02
integrating with navgs=4 and tol=1.398e-02
integrating with navgs=1 and tol=8.839e-03
integrating with navgs=0 and tol=6.250e-03
pass 1: epoch 3 of 3 starting distance error %nan
area/dist = 0.100
integrating with navgs=1024 and tol=2.001e-01
integrating with navgs=256 and tol=1.002e-01
integrating with navgs=64 and tol=5.039e-02
integrating with navgs=16 and tol=2.577e-02
integrating with navgs=4 and tol=1.398e-02
integrating with navgs=1 and tol=8.839e-03
integrating with navgs=0 and tol=6.250e-03
unfolding complete - removing small folds...
starting distance error %nan
removing remaining folds...
nlarea/dist = 100.000
integrating with navgs=32 and tol=1.795e-03
integrating with navgs=8 and tol=9.375e-04
integrating with navgs=2 and tol=5.413e-04
integrating with navgs=0 and tol=3.125e-04
smoothing final surface...
integrating with navgs=0 and tol=3.125e-04
final distance error %nan
optimization complete.

unfolding took 0.03 hours

Command Finished