Hi Carl

 

Can you upload your subject including the central sulcus labels you drew?

 

Cheers

Bruce

 

From: freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edu> On Behalf Of Trolle, Carl
Sent: Friday, August 12, 2022 12:12 PM
To: freesurfer@nmr.mgh.harvard.edu
Subject: [Freesurfer] Shift in cortical parcellation, issues with previously suggested solution

 

Ok. I'm trying to attach a copy of the output I get in the terminal-window.

 

The commands I've been running for the mris_register and mris_ca_label are "mris_register -L subject/label/?h.central_sulcus.label FREESURFER_HOME/average/?h.destrieux.simple.2009-07-29.gcs S_central subject/surf/?h.sphere FREESURFER_HOME/average/?h.average.curvature.filled.buckner40.tif subject/surf/?h.sphere.reg" and "mris_ca_label subject ?h subject/surf/?h.sphere.reg $FREESURFER_HOME/average/?h.destrieux.simple.2009-07-29.gcs subject/label/?h.aparc.a2009s.annot".

 

I hope I'm sending what you asked for, otherwise I'll be happy to correct this.

 

Kind regards,

 

Carl

 

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