Sun Sep 15 16:15:08 IST 2019 /home/leesa/Desktop/freesurfer_outputs/avgsubject /home/leesa/freesurfer/bin/recon-all -s avgsubject -cortribbon -aparc2aseg subjid avgsubject setenv SUBJECTS_DIR /home/leesa/Desktop/freesurfer_outputs FREESURFER_HOME /home/leesa/freesurfer Actual FREESURFER_HOME /home/leesa/freesurfer build-stamp.txt: freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c Linux sinha-Lenovo-Product 4.15.0-62-generic #69-Ubuntu SMP Wed Sep 4 20:55:53 UTC 2019 x86_64 x86_64 x86_64 GNU/Linux cputime unlimited filesize unlimited datasize unlimited stacksize 8192 kbytes coredumpsize 0 kbytes memoryuse unlimited vmemoryuse unlimited descriptors 1024 memorylocked 16384 kbytes maxproc 96050 maxlocks unlimited maxsignal 96050 maxmessage 819200 maxnice 0 maxrtprio 0 maxrttime unlimited total used free shared buff/cache available Mem: 24633364 3216096 13523204 84196 7894064 20933832 Swap: 18431996 0 18431996 ######################################## program versions used $Id: recon-all,v 1.580.2.16 2017/01/18 14:11:24 zkaufman Exp $ $Id: mri_motion_correct.fsl,v 1.15 2016/02/16 17:17:20 zkaufman Exp $ mri_convert.bin -all-info ProgramName: mri_convert.bin ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2019/09/15-10:45:08-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_convert.c,v 1.226 2016/02/26 16:15:24 mreuter Exp $ User: leesa Machine: sinha-Lenovo-Product Platform: Linux PlatformVersion: 4.15.0-62-generic CompilerName: GCC CompilerVersion: 40400 FLIRT version 5.5 $Id: talairach_avi,v 1.13 2015/12/23 04:25:17 greve Exp $ mri_convert.bin --version stable6 ProgramName: tkregister2_cmdl ProgramArguments: --all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2019/09/15-10:45:09-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: tkregister2.c,v 1.132.2.1 2016/08/02 21:17:29 greve Exp $ User: leesa Machine: sinha-Lenovo-Product Platform: Linux PlatformVersion: 4.15.0-62-generic CompilerName: GCC CompilerVersion: 40400 Program nu_correct, built from: Package MNI N3, version 1.12.0, compiled by nicks@terrier (x86_64-unknown-linux-gnu) on 2015-06-19 at 01:25:34 ProgramName: mri_make_uchar ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2019/09/15-10:45:09-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_make_uchar.c,v 1.4 2011/03/02 00:04:14 nicks Exp $ User: leesa Machine: sinha-Lenovo-Product Platform: Linux PlatformVersion: 4.15.0-62-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_normalize ProgramArguments: -all-info ProgramVersion: $Name: $ TimeStamp: 2019/09/15-10:45:09-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_normalize.c,v 1.88.2.3 2016/12/27 16:47:13 zkaufman Exp $ User: leesa Machine: sinha-Lenovo-Product Platform: Linux PlatformVersion: 4.15.0-62-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_watershed ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2019/09/15-10:45:09-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_watershed.cpp,v 1.103 2016/06/17 18:00:49 zkaufman Exp $ User: leesa Machine: sinha-Lenovo-Product Platform: Linux PlatformVersion: 4.15.0-62-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_gcut ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2019/09/15-10:45:09-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_gcut.cpp,v 1.14 2011/03/02 00:04:16 nicks Exp $ User: leesa Machine: sinha-Lenovo-Product Platform: Linux PlatformVersion: 4.15.0-62-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_segment ProgramArguments: -all-info ProgramVersion: $Name: $ TimeStamp: 2019/09/15-10:45:09-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_segment.c,v 1.43.2.1 2016/10/27 22:24:52 zkaufman Exp $ User: leesa Machine: sinha-Lenovo-Product Platform: Linux PlatformVersion: 4.15.0-62-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_label2label.bin ProgramArguments: -all-info ProgramVersion: $Name: $ TimeStamp: 2019/09/15-10:45:09-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_label2label.c,v 1.48.2.2 2016/12/12 14:15:26 zkaufman Exp $ User: leesa Machine: sinha-Lenovo-Product Platform: Linux PlatformVersion: 4.15.0-62-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_em_register ProgramArguments: -all-info ProgramVersion: $Name: $ TimeStamp: 2019/09/15-10:45:10-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_em_register.c,v 1.105.2.1 2016/10/27 22:25:10 zkaufman Exp $ User: leesa Machine: sinha-Lenovo-Product Platform: Linux PlatformVersion: 4.15.0-62-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_ca_normalize ProgramArguments: -all-info ProgramVersion: $Name: $ TimeStamp: 2019/09/15-10:45:10-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_ca_normalize.c,v 1.67.2.2 2016/10/27 22:25:09 zkaufman Exp $ User: leesa Machine: sinha-Lenovo-Product Platform: Linux PlatformVersion: 4.15.0-62-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_ca_register ProgramArguments: -all-info ProgramVersion: $Name: $ TimeStamp: 2019/09/15-10:45:10-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_ca_register.c,v 1.96.2.3 2016/10/27 22:25:10 zkaufman Exp $ User: leesa Machine: sinha-Lenovo-Product Platform: Linux PlatformVersion: 4.15.0-62-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_ca_label ProgramArguments: -all-info ProgramVersion: $Name: $ TimeStamp: 2019/09/15-10:45:10-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_ca_label.c,v 1.113.2.2 2016/10/27 22:25:10 zkaufman Exp $ User: leesa Machine: sinha-Lenovo-Product Platform: Linux PlatformVersion: 4.15.0-62-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_pretess ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2019/09/15-10:45:10-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_pretess.c,v 1.22 2013/08/30 18:12:25 mreuter Exp $ User: leesa Machine: sinha-Lenovo-Product Platform: Linux PlatformVersion: 4.15.0-62-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_fill ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2019/09/15-10:45:10-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_fill.c,v 1.119 2011/10/25 14:09:58 fischl Exp $ User: leesa Machine: sinha-Lenovo-Product Platform: Linux PlatformVersion: 4.15.0-62-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_tessellate ProgramArguments: -all-info ProgramVersion: $Name: $ TimeStamp: 2019/09/15-10:45:10-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_tessellate.c,v 1.38.2.1 2016/07/26 18:46:38 zkaufman Exp $ User: leesa Machine: sinha-Lenovo-Product Platform: Linux PlatformVersion: 4.15.0-62-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_concatenate_lta.bin ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2019/09/15-10:45:10-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_concatenate_lta.c,v 1.16 2015/11/21 00:06:20 greve Exp $ User: leesa Machine: sinha-Lenovo-Product Platform: Linux PlatformVersion: 4.15.0-62-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_normalize_tp2 ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2019/09/15-10:45:10-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_normalize_tp2.c,v 1.8 2011/03/02 00:04:23 nicks Exp $ User: leesa Machine: sinha-Lenovo-Product Platform: Linux PlatformVersion: 4.15.0-62-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_smooth ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2019/09/15-10:45:10-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_smooth.c,v 1.30 2014/01/21 18:48:21 fischl Exp $ User: leesa Machine: sinha-Lenovo-Product Platform: Linux PlatformVersion: 4.15.0-62-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_inflate ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2019/09/15-10:45:10-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_inflate.c,v 1.45 2016/01/20 23:42:15 greve Exp $ User: leesa Machine: sinha-Lenovo-Product Platform: Linux PlatformVersion: 4.15.0-62-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_curvature ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2019/09/15-10:45:10-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_curvature.c,v 1.31 2011/03/02 00:04:30 nicks Exp $ User: leesa Machine: sinha-Lenovo-Product Platform: Linux PlatformVersion: 4.15.0-62-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_sphere ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2019/09/15-10:45:11-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_sphere.c,v 1.61 2016/01/20 23:42:15 greve Exp $ User: leesa Machine: sinha-Lenovo-Product Platform: Linux PlatformVersion: 4.15.0-62-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_fix_topology ProgramArguments: -all-info ProgramVersion: $Name: $ TimeStamp: 2019/09/15-10:45:11-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_fix_topology.c,v 1.50.2.1 2016/10/27 22:25:58 zkaufman Exp $ User: leesa Machine: sinha-Lenovo-Product Platform: Linux PlatformVersion: 4.15.0-62-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_topo_fixer ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2019/09/15-10:45:11-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_topo_fixer.cpp,v 1.29 2011/03/02 00:04:34 nicks Exp $ User: leesa Machine: sinha-Lenovo-Product Platform: Linux PlatformVersion: 4.15.0-62-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_ca_label ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2019/09/15-10:45:11-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_ca_label.c,v 1.37 2014/02/04 17:46:42 fischl Exp $ User: leesa Machine: sinha-Lenovo-Product Platform: Linux PlatformVersion: 4.15.0-62-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_euler_number ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2019/09/15-10:45:11-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_euler_number.c,v 1.10 2013/01/14 22:39:14 greve Exp $ User: leesa Machine: sinha-Lenovo-Product Platform: Linux PlatformVersion: 4.15.0-62-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_make_surfaces ProgramArguments: -all-info ProgramVersion: $Name: $ TimeStamp: 2019/09/15-10:45:11-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_make_surfaces.c,v 1.164.2.4 2016/12/13 22:26:32 zkaufman Exp $ User: leesa Machine: sinha-Lenovo-Product Platform: Linux PlatformVersion: 4.15.0-62-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_register ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2019/09/15-10:45:11-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_register.c,v 1.63 2016/01/20 23:43:04 greve Exp $ User: leesa Machine: sinha-Lenovo-Product Platform: Linux PlatformVersion: 4.15.0-62-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_volmask ProgramArguments: --all-info ProgramVersion: $Name: $ TimeStamp: 2019/09/15-10:45:11-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_volmask.cpp,v 1.26.2.2 2016/11/18 20:05:18 zkaufman Exp $ User: leesa Machine: sinha-Lenovo-Product Platform: Linux PlatformVersion: 4.15.0-62-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_anatomical_stats ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2019/09/15-10:45:11-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_anatomical_stats.c,v 1.79 2016/03/14 15:15:34 greve Exp $ User: leesa Machine: sinha-Lenovo-Product Platform: Linux PlatformVersion: 4.15.0-62-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mrisp_paint ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2019/09/15-10:45:11-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mrisp_paint.c,v 1.12 2016/03/22 14:47:57 fischl Exp $ User: leesa Machine: sinha-Lenovo-Product Platform: Linux PlatformVersion: 4.15.0-62-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_curvature_stats ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2019/09/15-10:45:11-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_curvature_stats.c,v 1.65 2015/06/04 20:50:51 nicks Exp $ User: leesa Machine: sinha-Lenovo-Product Platform: Linux PlatformVersion: 4.15.0-62-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_calc ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2019/09/15-10:45:11-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mris_calc.c,v 1.54.2.1 2016/09/27 18:51:28 greve Exp $ User: leesa Machine: sinha-Lenovo-Product Platform: Linux PlatformVersion: 4.15.0-62-generic CompilerName: GCC CompilerVersion: 40400 $Id: mri_robust_register.cpp,v 1.77 2016/01/20 23:36:17 greve Exp $ ProgramName: mri_robust_register.bin ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2019/09/15-10:45:12-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_robust_register.cpp,v 1.77 2016/01/20 23:36:17 greve Exp $ User: leesa Machine: sinha-Lenovo-Product Platform: Linux PlatformVersion: 4.15.0-62-generic CompilerName: GCC CompilerVersion: 40400 $Id: mri_robust_template.cpp,v 1.54 2016/05/05 21:17:08 mreuter Exp $ ProgramName: mri_robust_template ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2019/09/15-10:45:12-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_robust_template.cpp,v 1.54 2016/05/05 21:17:08 mreuter Exp $ User: leesa Machine: sinha-Lenovo-Product Platform: Linux PlatformVersion: 4.15.0-62-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_and ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2019/09/15-10:45:12-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_and.c,v 1.4 2011/03/02 00:04:13 nicks Exp $ User: leesa Machine: sinha-Lenovo-Product Platform: Linux PlatformVersion: 4.15.0-62-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_or ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2019/09/15-10:45:12-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_or.c,v 1.5 2013/03/20 15:03:29 lzollei Exp $ User: leesa Machine: sinha-Lenovo-Product Platform: Linux PlatformVersion: 4.15.0-62-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_fuse_segmentations ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2019/09/15-10:45:12-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_fuse_segmentations.c,v 1.8 2011/03/02 00:04:15 nicks Exp $ User: leesa Machine: sinha-Lenovo-Product Platform: Linux PlatformVersion: 4.15.0-62-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_segstats ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2019/09/15-10:45:12-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_segstats.c,v 1.121 2016/05/31 17:27:11 greve Exp $ User: leesa Machine: sinha-Lenovo-Product Platform: Linux PlatformVersion: 4.15.0-62-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_relabel_hypointensities ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2019/09/15-10:45:12-GMT BuildTimeStamp: Jan 18 2017 16:38:58 CVS: $Id: mri_relabel_hypointensities.c,v 1.13 2015/05/15 18:44:10 nicks Exp $ User: leesa Machine: sinha-Lenovo-Product Platform: Linux PlatformVersion: 4.15.0-62-generic CompilerName: GCC CompilerVersion: 40400 ####################################### GCADIR /home/leesa/freesurfer/average GCA RB_all_2016-05-10.vc700.gca GCASkull RB_all_withskull_2016-05-10.vc700.gca AvgCurvTif folding.atlas.acfb40.noaparc.i12.2016-08-02.tif GCSDIR /home/leesa/freesurfer/average GCS DKaparc.atlas.acfb40.noaparc.i12.2016-08-02.gcs ####################################### #-------------------------------------------- #@# Cortical ribbon mask Sun Sep 15 16:15:12 IST 2019 /home/leesa/Desktop/freesurfer_outputs/avgsubject/mri mris_volmask --aseg_name aseg.presurf --label_left_white 2 --label_left_ribbon 3 --label_right_white 41 --label_right_ribbon 42 --save_ribbon avgsubject SUBJECTS_DIR is /home/leesa/Desktop/freesurfer_outputs loading input data... computing distance to left white surface computing distance to left pial surface computing distance to right white surface computing distance to right pial surface hemi masks overlap voxels = 14 writing volume /home/leesa/Desktop/freesurfer_outputs/avgsubject/mri/ribbon.mgz mris_volmask took 3.23 minutes writing ribbon files #----------------------------------------- #@# AParc-to-ASeg aparc Sun Sep 15 16:18:26 IST 2019 /home/leesa/Desktop/freesurfer_outputs/avgsubject mri_aparc2aseg --s avgsubject --volmask --aseg aseg.presurf.hypos --relabel mri/norm.mgz mri/transforms/talairach.m3z /home/leesa/freesurfer/average/RB_all_2016-05-10.vc700.gca mri/aseg.auto_noCCseg.label_intensities.txt relabeling unlikely voxels interior to white matter surface: norm: mri/norm.mgz XFORM: mri/transforms/talairach.m3z GCA: /home/leesa/freesurfer/average/RB_all_2016-05-10.vc700.gca label intensities: mri/aseg.auto_noCCseg.label_intensities.txt SUBJECTS_DIR /home/leesa/Desktop/freesurfer_outputs subject avgsubject outvol /home/leesa/Desktop/freesurfer_outputs/avgsubject/mri/aparc+aseg.mgz useribbon 0 baseoffset 0 RipUnknown 0 Reading lh white surface /home/leesa/Desktop/freesurfer_outputs/avgsubject/surf/lh.white Reading lh pial surface /home/leesa/Desktop/freesurfer_outputs/avgsubject/surf/lh.pial Loading lh annotations from /home/leesa/Desktop/freesurfer_outputs/avgsubject/label/lh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /home/leesa/Desktop/freesurfer_outputs/avgsubject/label/tmpdir.annot2std.14965/seg.1.cp_AARTI.ctab) Reading rh white surface /home/leesa/Desktop/freesurfer_outputs/avgsubject/surf/rh.white Reading rh pial surface /home/leesa/Desktop/freesurfer_outputs/avgsubject/surf/rh.pial Loading rh annotations from /home/leesa/Desktop/freesurfer_outputs/avgsubject/label/rh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /home/leesa/Desktop/freesurfer_outputs/avgsubject/label/tmpdir.annot2std.19273/seg.1.cp_AARTI.ctab) Have color table for lh white annotation Have color table for rh white annotation Loading ribbon segmentation from /home/leesa/Desktop/freesurfer_outputs/avgsubject/mri/ribbon.mgz Building hash of lh white Building hash of lh pial Building hash of rh white Building hash of rh pial Loading aseg from /home/leesa/Desktop/freesurfer_outputs/avgsubject/mri/aseg.presurf.hypos.mgz ASeg Vox2RAS: ----------- -1.00000 0.00000 0.00000 128.00000; 0.00000 0.00000 1.00000 -128.00000; 0.00000 -1.00000 0.00000 128.00000; 0.00000 0.00000 0.00000 1.00000; mghRead(mri/norm.mgz, -1): could not open file ------------------------- Labeling Slice relabeling unlikely voxels in interior of white matter Segmentation fault (core dumped) Linux sinha-Lenovo-Product 4.15.0-62-generic #69-Ubuntu SMP Wed Sep 4 20:55:53 UTC 2019 x86_64 x86_64 x86_64 GNU/Linux recon-all -s avgsubject exited with ERRORS at Sun Sep 15 16:18:44 IST 2019 To report a problem, see http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting