Hola Miguel Ángel,

What do you mean by exporting? The volumes? There is a command to gather the volumes from all subjects in the subjects directory, which is:

quantifyHippocampalSubfields.sh (in FreeSurfer 6.0)

quantifyHAsubregions.sh (in dev version)

Cheers,

/Eugenio

Juan Eugenio Iglesias

ERC Senior Research Fellow

Centre for Medical Image Computing (CMIC)

University College London

http://www.jeiglesias.com

http://cmictig.cs.ucl.ac.uk/

From: <freesurfer-bounces@nmr.mgh.harvard.edu> on behalf of Miguel Ángel Rivas Fernández <miguelrivasfdez@gmail.com>
Reply-To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
Date: Tuesday, 29 May 2018 at 09:32
To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
Subject: [Freesurfer] Command to export hippocampal subfields segmentations

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Hi Freesurfer developers,

I was looking for the freesurfer command to export hippocampal sufields segmentations but I did not found. What is the command to export this measures and in what folder are exported the file?

Thanks a lot.

Best,

Miguel Ángel Rivas Fernández