Hi Pedro,

There is probably a way to do that using FS tools from the command line, but the attached script should do the same. The result is a "data-per-vertex" file, which is the same as the .asc files from mris_convert. There is no geometry input, hence the vertex coordinates are all set to (0,0,0).

Hope it helps!

All the best,

Anderson


On 08/10/11 17:17, Pedro Paulo de Magalhães Oliveira Junior wrote:

I need to create a file where I have the parcellation value (structure name) per vertex.

I've tried mris_convert --annot /Applications/freesurfer/subjects/bert/label/lh.aparc.annot /Applications/freesurfer/subjects/bert/surf/lh.pial parc.asc

But I get the error: ERROR: unknown file annot file type specified for output: saida.asc

Has someone done this before?

Thanks
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