Can you elaborate? What do you mean it is not working as it should be?
From: freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edu>
On Behalf Of Peng Liu
Sent: Thursday, June 25, 2020 7:23 AM
To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
Subject: Re: [Freesurfer] Brodmann area labels
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Hi Bruce,
I have tried this label, but it seems not working as it should be. That is why I wanted to create labels like before.
Thank you so much!
PL
On Wed, 24 Jun 2020 at 16:58, Fischl, Bruce <BFISCHL@mgh.harvard.edu> wrote:
Hi Peng
I think 'lh.BA3b_exvivo.label' is the label you want. The _exvivo just means that the data that went into the prediction was acquired on ex vivo brains.
Cheers
Bruce
From: freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edu> On Behalf Of Peng Liu
Sent: Wednesday, June 24, 2020 7:38 AM
To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
Subject: [Freesurfer] Brodmann area labels
External Email - Use Caution
Dear Freesurfer experts,
I was trying to perform some ROI analysis with results obtained from recon-all. However I noticed that after recon-all, the labels created were like 'lh.BA3b_exvivo.label', whereas the labels I would want to create are like 'lh.BA3b.label'.
I have tried mri_annotation2label command, but the results I got were not as wanted either.
Does anyone know how to create labels like 'lh.BA3b.label'?
Any help would be appreciated a lot!
Many Thanks
PL
--------------------------------------------
Peng Liu, PhD Candidate
Institut für Kognitive Neurologie und Demenzforschung (IKND)
Otto-von-Guericke Universität Magdeburg
Deutsches Zentrum für Neurodegenerative Erkrankungen e.V. (DZNE)
Leipziger Str. 44| Haus 64| Raum 217
39120 Magdeburg, Deutschland
Phone: +49 391 67 25074
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