Hello fs experts,

We ran a command like ´recon-all -all -s HMN002 -hippocampal-subfields-T1T2 HMN002/T2/*.mgz T1T2´. Then, there was an error as ´Abort (core dumped)´ (which is also attached below). The error log file is also attached here. 

Error msg:
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setting seed for random number generator to 1234
using ../mri/aseg.presurf.mgz aseg volume to correct midline
$Id: mris_ca_label.c,v 1.37 2014/02/04 17:46:42 fischl Exp $
  $Id: mrisurf.c,v 1.775 2015/12/10 21:16:09 fischl Exp $
reading atlas from /cell_root/software/freesurfer/dev/sys/average/lh.curvature.buckner40.filled.desikan_killiany.2010-03-25.gcs...
reading color table from GCSA file....
average std = 1.0   using min determinant for regularization = 0.011
0 singular and 384 ill-conditioned covariance matrices regularized
input 0: MEAN CURVATURE, flags 0, avgs 5, name mean_curvature
labeling surface...
1592 labels changed using aseg
relabeling using gibbs priors...
000:   2975 changed, 134786 examined...
001:    698 changed, 12707 examined...
002:    152 changed, 3873 examined...
003:     50 changed, 880 examined...
004:     29 changed, 284 examined...
005:     16 changed, 164 examined...
006:      7 changed, 87 examined...
007:      1 changed, 42 examined...
008:      0 changed, 4 examined...
206 labels changed using aseg
000: 105 total segments, 64 labels (264 vertices) changed
001: 43 total segments, 4 labels (14 vertices) changed
002: 39 total segments, 0 labels (0 vertices) changed
1 filter iterations complete (10 requested, 0 changed)
Abort (core dumped)
Linux hippocampus.umd.edu 2.6.32-573.12.1.el6.x86_64 #1 SMP Mon Nov 23 12:55:32 EST 2015 x86_64 x86_64 x86_64 GNU/Linux

recon-all -s HMN002 exited with ERRORS at Tue Jan 26 00:23:40 EST 2016

Our freesurfer information: