Hi Matt - Have you ever ran any parallelized FSL program (like bedpostx) on your SGE cluster? Our scripts have built on the FSL scripts, adding support for our PBS cluster, but in theory the SGE functionality is still there, so it should be possible to make it work. Of course practice is often somewhat more complicated than theory...

a.y

On Thu, 16 May 2013, Hoptman, Matthew wrote:

Hi all,
I have access to a cluster computer.  Is there any way to parallelize tracula
using SGE without having to make a unique dmrirc for each subject?  If I could
pass subject numbers to the dmrirc that would be great, for example.

Thanks,

Matt

 

Matthew J. Hoptman, PhD
Research Scientist V
Nathan S. Kline Institute for Psychiatric Research

Research Associate Professor in Psychiatry
NYU School of Medicine

 

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