Hi Nikita,

Could you please be a bit more specific about your problem? What issue are you exactly referring to?

Also, can you please send us the log file of the hippocampal subfields (rather than of recon-all)?

Cheers,

/Eugenio

Juan Eugenio Iglesias

ERC Senior Research Fellow

Centre for Medical Image Computing (CMIC)

University College London

http://www.jeiglesias.com

http://cmictig.cs.ucl.ac.uk/

From: <freesurfer-bounces@nmr.mgh.harvard.edu> on behalf of Nikita Nogovitsyn <n.nogovitsyn@ucalgary.ca>
Reply-To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
Date: Tuesday, 12 June 2018 at 16:49
To: "freesurfer@nmr.mgh.harvard.edu" <freesurfer@nmr.mgh.harvard.edu>
Subject: Re: [Freesurfer] freesurfer 6 hippocampal longitudinal processing workflow question, more LH than RH files

External Email - Use Caution

I would like to report to have the same issue. There were no errors in the log yet the majority of results missing right hemisphere.

Attaching here the log file, or you can also access it via googledrive here: https://drive.google.com/open?id=13PVEWL4d6VuOJcIztWPTe83yz4Oi61Rv

Thanks

Nikita