OK, right-clicking on the surface did in fact de-select the label (turning it all to a uniform color).  Way to script a right-click?  (I see left click...)

Now that this is more or less working, I am looking to do something slightly different: i.e., combine the boundaries of one set of regions, one highlighed region, and an activation map.  Is there a way to fill just one label and leave outlines for a different set of labels in the same image?  Or alternatively set a different outline color for one label?  As in my previous post, I am looking to do this via tcl script if possible.

Thanks.


On Mon, Dec 5, 2011 at 3:07 PM, Bruce Fischl <fischl@nmr.mgh.harvard.edu> wrote:
yes, just use the -tcl <script name> option, but don't but an "exit" command at the end of the tcl script

cheers
Bruce

On Mon, 5 Dec 2011, Justin Baker wrote:

Ah - in that case I have a total newbie question, since I primarily use tksurfer via command line:

Is there a way to load up a case using the tcl script, but then leave it open rather than quit? 
This way I could try de-selecting with right-click.

Thanks.

On Mon, Dec 5, 2011 at 9:05 AM, Bruce Fischl <fischl@nmr.mgh.harvard.edu> wrote:
     I think so, but I want to see if it fixes your problem before I go digging through the
     tcl code to see what it is
     On Mon, 5 Dec 2011, Justin Baker wrote:

           Is there a command to do this via tcl script? 

           Justin

           On Sun, Dec 4, 2011 at 8:49 PM, Bruce Fischl <fischl@nmr.mgh.harvard.edu>
           wrote:
                What happens if you right click on the surface then?



           On Dec 4, 2011, at 8:17 PM, Justin Baker <justintbaker@gmail.com>
           wrote:

                Hi Bruce,

                Thanks.  Some progress!  That resulted in the label border
                turning red, but the fill is still white.  Any other
                thoughts?

                Cheers,
                Justin

                On Wed, Nov 30, 2011 at 2:54 PM, Bruce Fischl
                <fischl@nmr.mgh.harvard.edu> wrote:
                      Hi Justin

                      try unselecting the label with:

                      labl_select -1

                      cheers
                      Bruce
                      On Wed, 30 Nov 2011, Justin Baker wrote:


                            I am trying to use tksurfer to
                            script overlay of a label +
                            functional map
                            onto an fsaverage5 surface.

                            In particular, I want to set the
                            label to "fill" and color it red.

                            I have:

                            set labelstyle 0
                            labl_set_color 0 255 0 0

                            As you can see below, the output
                            of label_print_list shows that the
                            color of
                            the label should be "255 0 0 " but
                            it looks white in the output
                            image.

                            Am I missing something?  Thanks

                            ------------
                            subject is fsaverage5
                            hemi    is lh
                            surface is inflated

                            Label 0
                                   Name:
                            lh.17Networks_LH_ContB_PFClv.label,
                            109 vertices
                                   Structure: -1 Color: 255 0
                            0 Visible: 1
                                   Bounds: x -20.879234
                            12.792567 y -4.000000 109.853737 z
                            -4.033233
                            4.040778







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