Hi,

 

I am currently working on a project involving brain morphometry of 2 year old children.

We are interested in segmenting the ventricle and I tried to run freesurfer using the standard recon-all  -all for a first test.

 

Unfortunately, freesurfer reports an error (see attached log file).

 

I also read about that it is advised to run freesurfer with patient age >5 but maybe someone has an idea how to solve this.

As far as I get from the step it crashes at the intensity correction step?

Do I need to calculate some sort of template maybe ?

 

Any comments welcome

 

Yours

Frank

 

 

Web: http://www.umm.uni-heidelberg.de/inst/cbtm/ckm/