yes,
it happens at trac-all -qa after loading the *.nii file (see attachment) or when run as 
dmri_motion --dwi dwi_orig.nii.gz --mat dwi.ecclog --bval dmri/bvals --out dwi_motion.txt immediately.




On 20 February 2014 17:08, Anastasia Yendiki <ayendiki@nmr.mgh.harvard.edu> wrote:

Does the error in trac-all -prep with 5.3 occur when dmri_motion is run or at a different step?


On Thu, 20 Feb 2014, Gerit Pfuhl wrote:

Dear Tracula Experts,
after careful checking we still cannot run trac-all -qa or dwri-motion as the command always returns: could not
open bvals but the same file is flawlessy opened/retrieved in version 5.2.

[cat bvals is fine, trac-all -prep in 5.2. runs fine, trac-all -prep in 5.3 returns could not open bvals]

Kind regards
Gerit Pfuhl







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