Hi,
related to this topic, would I have to register my functionals twice if I
have resampled to spherical and talairach space for two separate analyses?
Register once using the motion corrected volume for spherical and once
using the motion corrected smoothed volume for talairach?
Cameron


  

Yes, you just spec the motion corrected volume when you make a new
analysis. You will need to re-run inorm, but you can do this outside of
preproc with

inorm-sess -funcstem fmc ...

Cameron Ellis wrote:

    

Hi all,
If I were to perform a surface-based analysis, resampling to spherical
space, and I did not want to smooth in the volume, would I need to
preprocess my data again without smoothing or could I just specify the
motion corrected volume in  in a new analysis. I think the answer is: I
could just specify the motion corrected volume, however, since the global
mean for intensity normalization is calculated at the end of
preprocessing
after smoothing and exists in the fmcsm.meanval file, will there be a
problem with the inorm in later stages, will it be performed etc. if I
just specify the fmc volume in a new analysis?
Thanks,
Cameron
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer




      

--
Douglas N. Greve, Ph.D.
MGH-NMR Center
greve@nmr.mgh.harvard.edu
Phone Number: 617-724-2358
Fax: 617-726-7422

In order to help us help you, please follow the steps in:
surfer.nmr.mgh.harvard.edu/fswiki/BugReporting




    

_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer


  

-- 
Douglas N. Greve, Ph.D.
MGH-NMR Center
greve@nmr.mgh.harvard.edu
Phone Number: 617-724-2358 
Fax: 617-726-7422

In order to help us help you, please follow the steps in:
surfer.nmr.mgh.harvard.edu/fswiki/BugReporting