Try mri_segcentroids. Run it with --help to get docs

On 12/20/2021 3:34 AM, Julie Ottoy wrote:

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Hi Doug,

Just checking in with the question below. Does Freesurfer have such an option?

Thanks,
Julie

On Tue, 14 Dec 2021 at 18:38, Julie Ottoy <julie.jj.ottoy@gmail.com> wrote:
Hello FreeSurfer team,

I was wondering if there is a way to calculate a distance matrix between atlas-based regions (e.g. between their centers of mass) in volumetric space (MNI152) space? 

Thank you for the information!
Best regards
Julie

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