Dear all,

I am currently trying to automatically generate Freesurfer screenshots and, to this purpose, I need to change the color scale of the surface overlay to “Color Wheel - Inverse” and with specific min and max threshold.

Looking for a way to achieve this, I found this thread with similar request, but unfortunately no solution was posted. Thus Heath (who kindly replied to my email) suggested to re-post the question to the entire FreeSurfer community.

So far I am able only to set the min max threshold with the following command:

freeview -f $SUBJECTS_DIR/subj01/surf/lh.inflated:overlay=/pathToOverlay/MyOverlay.mgh:overlay_threshold=-10,10

Does anybody know the command line to set the overlay color scale to “Color Wheel (Inverse)”?

Thank you!

Any help is very much appreciated!

Best regards,

Anna

-------------------------

Anna Gardumi

Department of Cognitive Neuroscience | Faculty of Psychology & Neuroscience | Maastricht University

Postal address: PO Box 616, 6200MD, Maastricht, The Nederlands

Visiting address: Oxfordlaan 55, room 2.012, 6229EV

anna.gardumi@maastrichtuniversity.nl