Hello,

 

I ran recon-all -all on my subject. The process ended after several minutes with this message at the end:

recon-all -s 350_FS exited with ERRORS at Fri Nov 30 17:57:59 PST 2012

 

I tried loading the pial and white surfaces for editing using this command:

tkmedit 350_FS brainmask.mgz rh.white -aux-surface lh.white

 

but looks like these surfaces do not exist (since the recon-all exited prematurely). When I check the recon-all.log file I do not see any errors except a few MCSRCH errors. So I cannot understand what exactly went wrong in the recon-all. I've attached the recon-all log file. Can someone please tell me what the problem is and how I can fix it?

 

Many thanks,

Negar

p.s. I tried on more than one subject and I still face the same issue.

 

 

Negar Memarian, MASc, PhD
NSERC Postdoctoral Fellow
Department of Neurology
David Geffen School of Medicine at UCLA