Hi Dilip

you need to run your image through recon-all.

cheers
Bruce

On Sun, 9 Apr 2017, Dilip Puri
wrote:

> Hi all,
>
> I've 200 analyze7.5 format images(OASIS Dataset) and I want to segment
> HippoCampus.
>
> My input file xyz.img and output file will be like xyz_seg.img which
> contains only hippocampus image it like Grond Truth image for my original
> input image.
>
> Here is sample files including original and segmented mask link.
>
> Even I am very new to FREESURFER so I don't know the procedure to
> reconstruct the images.
>
>
> Kindly help me.
>
>

_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer


The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.