Thank you I'll try that.

On Thursday, July 21, 2016, Bruce Fischl <fischl@nmr.mgh.harvard.edu> wrote:
try using the -rl <vol name> switch in mri_convert. It will "reslice
like" the <vol name> you give. Give it the 512 volume as <vol name>

cheers
Bruce
On Thu,
21 Jul 2016, Dorsa Haji Ghaffari wrote:

> Hi,
> I have segmented 288 slices of 512x512 dicom MRIs but when I create a mask of the
> left thalamus I get 256 slices of 256x256 images. Is there any way to get the same
> number of slices with the same size as I had before?
>
> Thank you
>
> Dorsa
>
>
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