Hello Everyone!

I have run LGI analyses according to the JoVE article: https://www.jove.com/video/3417/how-to-measure-cortical-folding-from-mr-images-step-step-tutorial-to

I created labels from the significant clusters and would like to extract the lgi values from these labels and found that past email chains suggested the following:

>>> mris_anatomical_stats -l ?h_lgi_significant_cluster.label -t SUBJ/surf/?h.pial_lgi -f ${subj}/stats/?h.aparc_lgi.stats ${subj} ?h
>>> aparcstats2table --subjects ALL_YOUR_SUBJECTS --hemi ?h --meas thickness --parc aparc_lgi --tablefile aparc_lgi_?h.txt

However the output results in a stats table with the following headings:

ColHeaders StructName NumVert SurfArea GrayVol ThickAvg ThickStd MeanCurv GausCurv FoldInd CurvInd