Hello

I need separate grey and white volumes for the frontal and temporal lobes. I have values for grey volume from

 

mri_annotation2label --subject 01 --hemi lh --lobesStrict lobar_annotation

mris_anatomical_stats    on the  lh.lobar_annotation.annot file to generate a text file.

 

 

I’ve also run similar to the following and now have a text file wmparc.a2009.stats.

 

mri_aparc2aseg --s subject --labelwm --hypo-as-wm --rip-unknown

--volmask --o mri/wmparc.a2009s.mgz --a2009s --ctxseg aparc.a2009s+aseg.mgz

 

  mri_segstats --seg mri/wmparc.a2009s.mgz --sum

stats/wmparc.a2009s.stats --pv mri/norm.mgz --excludeid 0

--brain-vol-from-seg --brainmask mri/brainmask.mgz --in mri/norm.mgz

--in-intensity-name norm --in-intensity-units MR --subject subject

--surf-wm-vol

--ctab $FREESURFER_HOME/WMParcStatsLUT.txt --etiv

 

 

Is there a standard list of labels in this file that are used to create the frontal and temporal lobes?

 

 

Thanks

 

 



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