------------------------------------------------------------------------ Segmentation violation detected at Sat Sep 28 23:47:42 2019 ------------------------------------------------------------------------ Configuration: Crash Decoding : Disabled Current Visual : 0x55 (class 4, depth 24) Default Encoding: UTF-8 GNU C Library : 2.12 stable MATLAB Root : /home/guodong/tool/freesurfer/MCRv80 MATLAB Version : 8.0.0.783 (R2012b) Operating System: Linux 2.6.32-642.el6.x86_64 #1 SMP Tue May 10 17:27:01 UTC 2016 x86_64 Processor ID : x86 Family 6 Model 79 Stepping 1, GenuineIntel Virtual Machine : Java 1.6.0_17-b04 with Sun Microsystems Inc. Java HotSpot(TM) 64-Bit Server VM mixed mode Window System : The X.Org Foundation (12001000), display localhost:13.0 Fault Count: 1 Abnormal termination: Segmentation violation Register State (from fault): RAX = 0000000000000000 RBX = 00007fcc5b5fe700 RCX = 0000000000000000 RDX = 00007fcb7eefb910 RSP = 00007fcf60d34220 RBP = 0000000000000000 RSI = 0000000000000000 RDI = 00007fcc5b5fe700 R8 = 0000000000000000 R9 = 00007fcf54000070 R10 = 0000000000020670 R11 = 0000000000000202 R12 = 00007fcae8226c70 R13 = 0000000000000037 R14 = 0000000000000001 R15 = 0000000000000001 RIP = 0000003253608213 EFL = 0000000000010202 CS = 0033 FS = 0000 GS = 0000 Stack Trace (from fault): [ 0] 0x00007fcf75d011de /home/guodong/tool/freesurfer/MCRv80/bin/glnxa64/libmwfl.so+00516574 _ZN2fl4diag15stacktrace_base7captureERKNS0_14thread_contextEm+000158 [ 1] 0x00007fcf75d024b2 /home/guodong/tool/freesurfer/MCRv80/bin/glnxa64/libmwfl.so+00521394 [ 2] 0x00007fcf75d03ffe /home/guodong/tool/freesurfer/MCRv80/bin/glnxa64/libmwfl.so+00528382 _ZN2fl4diag13terminate_logEPKcRKNS0_14thread_contextE+000174 [ 3] 0x00007fcf6d6a5093 /home/guodong/tool/freesurfer/MCRv80/bin/glnxa64/libmwmcr.so+00557203 _ZN2fl4diag13terminate_logEPKcPK8ucontext+000067 [ 4] 0x00007fcf6d6a1b9d /home/guodong/tool/freesurfer/MCRv80/bin/glnxa64/libmwmcr.so+00543645 [ 5] 0x00007fcf6d6a3835 /home/guodong/tool/freesurfer/MCRv80/bin/glnxa64/libmwmcr.so+00550965 [ 6] 0x00007fcf6d6a3a55 /home/guodong/tool/freesurfer/MCRv80/bin/glnxa64/libmwmcr.so+00551509 [ 7] 0x00007fcf6d6a40fe /home/guodong/tool/freesurfer/MCRv80/bin/glnxa64/libmwmcr.so+00553214 [ 8] 0x00007fcf6d6a4295 /home/guodong/tool/freesurfer/MCRv80/bin/glnxa64/libmwmcr.so+00553621 [ 9] 0x000000325360f7e0 /lib64/libpthread.so.0+00063456 [ 10] 0x0000003253608213 /lib64/libpthread.so.0+00033299 pthread_join+000035 [ 11] 0x00007fce60fc351d /tmp/MCR_1444523747/.mcrCache8.0/Segmen0/autofs/cluster/koen/eugenio/GEMS-Release-linux/bin/kvlGEMSMatlab.mexa64+03945757 _ZN3itk13MultiThreader30SpawnWaitForSingleMethodThreadEm+000045 [ 12] 0x00007fce60fc3d4c /tmp/MCR_1444523747/.mcrCache8.0/Segmen0/autofs/cluster/koen/eugenio/GEMS-Release-linux/bin/kvlGEMSMatlab.mexa64+03947852 _ZN3itk13MultiThreader19SingleMethodExecuteEv+000284 [ 13] 0x00007fce60f5097e /tmp/MCR_1444523747/.mcrCache8.0/Segmen0/autofs/cluster/koen/eugenio/GEMS-Release-linux/bin/kvlGEMSMatlab.mexa64+03475838 [ 14] 0x00007fce610d459e /tmp/MCR_1444523747/.mcrCache8.0/Segmen0/autofs/cluster/koen/eugenio/GEMS-Release-linux/bin/kvlGEMSMatlab.mexa64+05064094 _ZN3kvl46AtlasMeshDeformationConjugateGradientOptimizer18GetCostAndGradientEPKN3itk12MapContainerImNS1_5PointIdLj3EEEEERdRNS1_12SmartPointerINS2_ImNS1_6VectorIdLj3EEEEEEE+001102 [ 15] 0x00007fce610d51d9 /tmp/MCR_1444523747/.mcrCache8.0/Segmen0/autofs/cluster/koen/eugenio/GEMS-Release-linux/bin/kvlGEMSMatlab.mexa64+05067225 _ZN3kvl46AtlasMeshDeformationConjugateGradientOptimizer9BackTrackERN3itk12SmartPointerINS1_12MapContainerImNS1_5PointIdLj3EEEEEEERdS9_RNS2_INS3_ImNS1_6VectorIdLj3EEEEEEEPKSC_ddd+001385 [ 16] 0x00007fce610d58f7 /tmp/MCR_1444523747/.mcrCache8.0/Segmen0/autofs/cluster/koen/eugenio/GEMS-Release-linux/bin/kvlGEMSMatlab.mexa64+05069047 _ZN3kvl46AtlasMeshDeformationConjugateGradientOptimizer19PerformOneIterationEv+001399 [ 17] 0x00007fce60f3fe43 /tmp/MCR_1444523747/.mcrCache8.0/Segmen0/autofs/cluster/koen/eugenio/GEMS-Release-linux/bin/kvlGEMSMatlab.mexa64+03407427 [ 18] 0x00007fce60efa89c /tmp/MCR_1444523747/.mcrCache8.0/Segmen0/autofs/cluster/koen/eugenio/GEMS-Release-linux/bin/kvlGEMSMatlab.mexa64+03123356 [ 19] 0x00007fce60efa082 /tmp/MCR_1444523747/.mcrCache8.0/Segmen0/autofs/cluster/koen/eugenio/GEMS-Release-linux/bin/kvlGEMSMatlab.mexa64+03121282 mexFunction+000210 [ 20] 0x00007fcf6cf3769a /home/guodong/tool/freesurfer/MCRv80/bin/glnxa64/libmex.so+00112282 mexRunMexFile+000090 [ 21] 0x00007fcf6cf334e9 /home/guodong/tool/freesurfer/MCRv80/bin/glnxa64/libmex.so+00095465 [ 22] 0x00007fcf6cf3433c /home/guodong/tool/freesurfer/MCRv80/bin/glnxa64/libmex.so+00099132 [ 23] 0x00007fcf6bf12a4b /home/guodong/tool/freesurfer/MCRv80/bin/glnxa64/libmwm_dispatcher.so+00596555 _ZN8Mfh_file11dispatch_fhEiPP11mxArray_tagiS2_+000539 [ 24] 0x00007fcf6c364e56 /home/guodong/tool/freesurfer/MCRv80/bin/glnxa64/libmwm_interpreter.so+02264662 [ 25] 0x00007fcf6c3151c6 /home/guodong/tool/freesurfer/MCRv80/bin/glnxa64/libmwm_interpreter.so+01937862 [ 26] 0x00007fcf6c319ab4 /home/guodong/tool/freesurfer/MCRv80/bin/glnxa64/libmwm_interpreter.so+01956532 [ 27] 0x00007fcf6c3160d3 /home/guodong/tool/freesurfer/MCRv80/bin/glnxa64/libmwm_interpreter.so+01941715 [ 28] 0x00007fcf6c316ed7 /home/guodong/tool/freesurfer/MCRv80/bin/glnxa64/libmwm_interpreter.so+01945303 [ 29] 0x00007fcf6c382760 /home/guodong/tool/freesurfer/MCRv80/bin/glnxa64/libmwm_interpreter.so+02385760 [ 30] 0x00007fcf6bf12a4b /home/guodong/tool/freesurfer/MCRv80/bin/glnxa64/libmwm_dispatcher.so+00596555 _ZN8Mfh_file11dispatch_fhEiPP11mxArray_tagiS2_+000539 [ 31] 0x00007fcf6c364e56 /home/guodong/tool/freesurfer/MCRv80/bin/glnxa64/libmwm_interpreter.so+02264662 [ 32] 0x00007fcf6c3151c6 /home/guodong/tool/freesurfer/MCRv80/bin/glnxa64/libmwm_interpreter.so+01937862 [ 33] 0x00007fcf6c319ab4 /home/guodong/tool/freesurfer/MCRv80/bin/glnxa64/libmwm_interpreter.so+01956532 [ 34] 0x00007fcf6c3160d3 /home/guodong/tool/freesurfer/MCRv80/bin/glnxa64/libmwm_interpreter.so+01941715 [ 35] 0x00007fcf6c316ed7 /home/guodong/tool/freesurfer/MCRv80/bin/glnxa64/libmwm_interpreter.so+01945303 [ 36] 0x00007fcf6c382760 /home/guodong/tool/freesurfer/MCRv80/bin/glnxa64/libmwm_interpreter.so+02385760 [ 37] 0x00007fcf6bf12a4b /home/guodong/tool/freesurfer/MCRv80/bin/glnxa64/libmwm_dispatcher.so+00596555 _ZN8Mfh_file11dispatch_fhEiPP11mxArray_tagiS2_+000539 [ 38] 0x00007fcf6c34388f /home/guodong/tool/freesurfer/MCRv80/bin/glnxa64/libmwm_interpreter.so+02128015 [ 39] 0x00007fcf6c342c69 /home/guodong/tool/freesurfer/MCRv80/bin/glnxa64/libmwm_interpreter.so+02124905 [ 40] 0x00007fcf6c2a129c /home/guodong/tool/freesurfer/MCRv80/bin/glnxa64/libmwm_interpreter.so+01462940 inCallFcnWithTrap+000092 [ 41] 0x00007fcf6c307bfb /home/guodong/tool/freesurfer/MCRv80/bin/glnxa64/libmwm_interpreter.so+01883131 [ 42] 0x00007fcf6c2a0168 /home/guodong/tool/freesurfer/MCRv80/bin/glnxa64/libmwm_interpreter.so+01458536 _Z28inCallFcnWithTrapInDesiredWSiPP11mxArray_tagiS1_PKcbP15inWorkSpace_tag+000104 [ 43] 0x00007fcf6a127b09 /home/guodong/tool/freesurfer/MCRv80/bin/glnxa64/libmwiqm.so+02878217 _ZN3iqm15BaseFEvalPlugin7executeEP15inWorkSpace_tagRN5boost10shared_ptrIN14cmddistributor17IIPCompletedEventEEE+000457 [ 44] 0x00007fcf6d67c219 /home/guodong/tool/freesurfer/MCRv80/bin/glnxa64/libmwmcr.so+00389657 [ 45] 0x00007fcf6a0fdbfa /home/guodong/tool/freesurfer/MCRv80/bin/glnxa64/libmwiqm.so+02706426 [ 46] 0x00007fcf6a0f129d /home/guodong/tool/freesurfer/MCRv80/bin/glnxa64/libmwiqm.so+02654877 [ 47] 0x00007fcf6992fc36 /home/guodong/tool/freesurfer/MCRv80/bin/glnxa64/libmwuix.so+00474166 [ 48] 0x00007fcf6993acc2 /home/guodong/tool/freesurfer/MCRv80/bin/glnxa64/libmwuix.so+00519362 [ 49] 0x00007fcf6d2cca11 /home/guodong/tool/freesurfer/MCRv80/bin/glnxa64/libmwservices.so+01628689 _ZSt8for_eachIN9__gnu_cxx17__normal_iteratorIPN5boost8weak_ptrIN4sysq10ws_ppeHookEEESt6vectorIS6_SaIS6_EEEENS4_8during_FIS6_NS2_10shared_ptrIS5_EEEEET0_T_SH_SG_+000081 [ 50] 0x00007fcf6d2cdaeb /home/guodong/tool/freesurfer/MCRv80/bin/glnxa64/libmwservices.so+01633003 _ZN4sysq12ppe_for_eachINS_8during_FIN5boost8weak_ptrINS_10ws_ppeHookEEENS2_10shared_ptrIS4_EEEEEET_RKS9_+000251 [ 51] 0x00007fcf6d2cb5a2 /home/guodong/tool/freesurfer/MCRv80/bin/glnxa64/libmwservices.so+01623458 _ZN4sysq19ppePollingDuringFcnEb+000114 [ 52] 0x00007fcf6d2cb969 /home/guodong/tool/freesurfer/MCRv80/bin/glnxa64/libmwservices.so+01624425 _ZN4sysq11ppeMainLoopEiib+000121 [ 53] 0x00007fcf6d2cbb08 /home/guodong/tool/freesurfer/MCRv80/bin/glnxa64/libmwservices.so+01624840 _ZN4sysq11ppeLoopIfOKEiib+000152 [ 54] 0x00007fcf6d2cbc63 /home/guodong/tool/freesurfer/MCRv80/bin/glnxa64/libmwservices.so+01625187 _ZN4sysq20processPendingEventsEiib+000147 [ 55] 0x00007fcf6d669664 /home/guodong/tool/freesurfer/MCRv80/bin/glnxa64/libmwmcr.so+00312932 [ 56] 0x00007fcf6d669b3c /home/guodong/tool/freesurfer/MCRv80/bin/glnxa64/libmwmcr.so+00314172 [ 57] 0x00007fcf6d663592 /home/guodong/tool/freesurfer/MCRv80/bin/glnxa64/libmwmcr.so+00288146 [ 58] 0x0000003253607aa1 /lib64/libpthread.so.0+00031393 [ 59] 0x0000003252ee8aad /lib64/libc.so.6+00953005 clone+000109 This error was detected while a MEX-file was running. If the MEX-file is not an official MathWorks function, please examine its source code for errors. Please consult the External Interfaces Guide for information on debugging MEX-files. If this problem is reproducible, please submit a Service Request via: http://www.mathworks.com/support/contact_us/ A technical support engineer might contact you with further information. Thank you for your help.