Have a look at subject/stats/?h.aparc.stats

doug

Burmicz, Ryszarda wrote:
Where can I find global and local thickness / volume measures for individual subjects?

Hi!

I am new to Freesurfer; I have run reconstruction steps with recon-all.  I can find no reference to thickness values calculated as part of this process, apart from visualising them in Freesurfer - is there a specific file from which I can extract this information without running the GUI?  I am comparing data from a single subject across different scanning protocols in order to look at variation in thickness.  So ultimately I would like to produce tabulated data of global and local thicknesses.

Many thanks for your help,

Rysia


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