Hi Bruce

The maps are .mgz format and are % overlap (across 40 subjects). They were generated using

-labels turned into surface overlay using mri_vol2surf
-then registered to fsaverage using mri_surf2surf
-then averaged within fsaverage space using mri_concat and then mris_fwhm to smooth.

Best
Trisanna

--
Ph.D. Candidate
McGill University
Integrated Program in Neuroscience
Psychology


On Mon, May 15, 2017 at 2:53 PM, Bruce Fischl <fischl@nmr.mgh.harvard.edu> wrote:
what format is your map of p-values in?
On Mon, 15 May 2017, Trisanna
Sprung-Much wrote:

> Hi Bruce
> I would not know where to start (not an avid matlab user) - what input would
> be needed to be fed into matlab?
>
> Trisanna
>
> --
> Ph.D. CandidateMcGill University
> Integrated Program in Neuroscience
> Psychology
>
>
> On Mon, May 15, 2017 at 12:52 PM, Bruce Fischl <fischl@nmr.mgh.harvard.edu>
> wrote:
>       hmmm, should be pretty easy in matlab, no?
>       On Mon, 15 May 2017, Trisanna
>       Sprung-Much wrote:
>
>       > Hi there
>       > I have generated some anatomical probabilistic maps as
>       overlays on the
>       > fsaverage pial surface. Is there a way to automatically find
>       the vertex
>       > coordinates of the vertex with the highest probability of
>       overlap? Or does
>       > this have to be done manually in Freeview?
>       >
>       > Many thanks
>       >
>       > Trisanna
>       > --
>       > Ph.D. CandidateMcGill University
>       > Integrated Program in Neuroscience
>       > Psychology
>       >
>       >
>       >
>       >
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