Hi Freesurfer List,

I had a (hopefully quick) question about surface viewers and data orientation in tksurfer v. freeview. 

I processed all my data in freesurfer v5.3.0 (on a linux cluster) and noticed something odd when I viewed surfaces. For tksurfer, the surfaces were upside down when I opened them (see attached pic: tksurfer.png); for freeview, the data looked fine (see attached pic: freeview.png).

I believe the orientation of the images is correct (judging by the freeview axes), but wondered if this was something others had run into? I uploaded an example subject to the Martinos Center FileDrop (link: http://gate.nmr.mgh.harvard.edu/filedrop2/?p=9491zcnivqw). 

Any thoughts are greatly appreciated! Thanks much!

Best,
Jamie.

--
Jamie L. Hanson
Postdoctoral Fellow, Carolina Consortium on Human Development
Duke University
417 Chapel Drive
Duke West Campus
Sociology-Psychology Building, Room 07A
Durham, NC 27710
Email: jamielarshanson@gmail.com
Website: http://jamiehanson.org/