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Hi Douglas,

Just following up on this. Thanks!

On Wed, Mar 17, 2021 at 6:12 PM Jordan Mullins <jordan.mullins@email.ucr.edu> wrote:
Yes! Results attached.

On Wed, Mar 17, 2021 at 5:54 PM Douglas N. Greve <dgreve@mgh.harvard.edu> wrote:

Can you run
ls -l $FREESURFER_HOME/bin/mri_aparc2aseg $FREESURFER_HOME/bin/make_average_subject
and send the result?

Also, the result of
which mri_aparc2aseg
which make_average_subject



On 3/17/2021 8:36 PM, Jordan Mullins wrote:

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Yes, I had seen that report and had downloaded the patch, but still got the same error. Are there any other steps I can take?

On Wed, Mar 17, 2021 at 2:59 PM Douglas N. Greve <dgreve@mgh.harvard.edu> wrote:
This problem is documented (along with a fix) on our release notes
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On 3/16/2021 3:39 PM, Jordan Mullins wrote:

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Yes, I used the make_average_subject command. I've attached a text file below of the command line and terminal output from my attempt to average two subjects. I get the same error when I try this with the full sample.

On Tue, Mar 16, 2021 at 9:12 AM Douglas N. Greve <dgreve@mgh.harvard.edu> wrote:
What command are you using? make_average_subject? Send the command line and terminal output

On 3/10/2021 3:53 PM, Jordan Mullins wrote:

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Hello,

I am trying to create an average subject from a set of subjects, but keep getting an error that says "mghRead(mri/norm.mgz, -1): could not open file". I've read that several others have solved this issue by installing the patch available at MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be http://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/6.0.0-patch/. I did this, but continue to get the same error. I'm working with Freesurver Version 6.0.0 and MacOS Big Sur Version 11.2.3. I've attached the recon-all.log below, but please let me know if you need additional information.

Any insight on this would be appreciated! Thank you!

Jordan

--
Jordan L. Mullins, B.A.
Doctoral Student, Department of Psychology
University of California, Riverside


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--
Jordan L. Mullins, B.A.
Doctoral Student, Department of Psychology
University of California, Riverside


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_______________________________________________
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--
Jordan L. Mullins, B.A.
Doctoral Student, Department of Psychology
University of California, Riverside


_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
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--
Jordan L. Mullins, B.A.
Doctoral Student, Department of Psychology
University of California, Riverside



--
Jordan L. Mullins, B.A.
Doctoral Student, Department of Psychology
University of California, Riverside
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