Dear Freesurfer list,
I am using Freesurfer 6.0 in Ubuntu 16.04. In the troubleshooting I have
encountered a frequent problem with many of my subjects. I enclose an
example. Is it necessary to edit the areas that have not been included
in the wm mask? Namely, that tiny area close to the temporal horn of the
left lateral ventricle (Image_1)? As you can see in the other image
(Image_2) this might be affecting the pial surface that seems to include
parts of wm in the vicinity of the temporal horn. How would you deal
with this?
Best wishes,
Manuel