Hei

 

Dette er  en tekstfil i web diskusjonsforum. Det er mange som bruker Freesurfer. Teksten dreier seg om ny lisensfil i samband med en ny versjon. Det aktuelle mailen angår ikke meg. Jeg bruker gammel Freesurfer på jobben som ikke trenger ny lisensfil.

 

Hilsen

 

Pål

 

Dr. philos. Pål G. Larsson

Seksjonsleder Klinisk nevrofysiologi

Nevrokirurgisk avdeling

Oslo Universitetssykehus

Postboks 4950 Nydalen

0424 Oslo

 

Tlf.:  23074407

Mobil: 93429791

 

E-mail: pall@ous-hf.no

 

Denne meldingen innholder ikke sensitiv informasjon som bryter med Ous sine regler for taushetsplikt

 

Fra: freesurfer-bounces@nmr.mgh.harvard.edu [mailto:freesurfer-bounces@nmr.mgh.harvard.edu] På vegne av Taylor Hilton
Sendt: 8. februar 2017 15:45
Til: Freesurfer support list
Emne: Re: [Freesurfer] recon-all issue {Disarmed}

 

Apologies, that was an old log, attaching the relevant one here.

 



On Feb 7, 2017, at 6:02 PM, Douglas Greve <greve@nmr.mgh.harvard.edu> wrote:

 

According to the log file, the error is that you need a new license:

GNU libc version: 2.23
ERROR: Systems running GNU glibc version greater than 2.15
require a newly formatted license file (it's free). Please
download a new one from the following page:
MailScanner has detected a possible fraud attempt from "na01.safelinks.protection.outlook.com" claiming to be http://surfer.nmr.mgh.harvard.edu/registration.html

 

 

On 2/7/17 12:49 PM, Taylor Hilton wrote:

Yes I’ll attach it here.  I’m using a linux server(Ubuntu).

 



 

On Feb 7, 2017, at 12:32 PM, Douglas Greve <greve@nmr.mgh.harvard.edu> wrote:

 

Can you send the full recon-all.log? What platform are you running on?

 

On 2/7/17 11:19 AM, Taylor Hilton wrote:

Hi all,

 

Having trouble with an error running "recon-all -subjid ${i} -autorecon2” across all subjects.  

 

Below is where it has the error in recon-all.log.  We also tried running the last command (“ln -s …”) manually and got the error “ln: failed to create symbolic link ‘lh.white.H’: Operation not supported.” whereas the rest of the commands ran normally.

 

#--------------------------------------------

#@# Curv .H and .K lh Tue Feb  7 07:29:43 EST 2017

/home/jamielh/Volumes/Hanson/Pardini_Projects/K_award/10007/surf

 

 mris_curvature -w lh.white.preaparc 

 

total integrated curvature = 18.936*4pi (237.960) --> -18 handles

ICI = 230.2, FI = 1697.2, variation=29040.790

writing Gaussian curvature to ./lh.white.preaparc.K...done.

writing mean curvature to ./lh.white.preaparc.H...done.

rm -f lh.white.H

ln -s lh.white.preaparc.H lh.white.H

Linux pfc 4.4.0-59-generic #80-Ubuntu SMP Fri Jan 6 17:47:47 UTC 2017 x86_64 x86_64 x86_64 GNU/Linux

 

recon-all -s 10007 exited with ERRORS at Tue Feb  7 07:29:46 EST 2017

 

 

————————————————————————————————————————————————

 

 

We also tried the solution laid out in this thread with no luck:

 

Any help is very appreciated!

 

- B. Taylor Hilton

Lab Data Coordinator, University of Pittsburgh

 

 

 

 



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