External Email - Use Caution
Hello Douglas,Yes it worksEl jue., 14 mar. 2019 a las 18:51, Greve, Douglas N.,Ph.D. (<DGREVE@mgh.harvard.edu>) escribió:It looks like the library is not set up properly. Does freesurfer work
outside of matlab?
On 3/14/19 1:46 PM, Miguel Ángel Rivas Fernández wrote:
>
> External Email - Use Caution
>
>
> Dear Freesurfer devs,
>
>
> Have you had occasion to review this error?. Could it be due to the
> gcc version?
>
> Thank you very much for your help.
>
>
> Best regards,
>
> El mié., 13 mar. 2019 a las 16:09, Miguel Ángel Rivas Fernández
> (<miguelrivasfdez@gmail.com <mailto:miguelrivasfdez@gmail.com>>) escribió:
>
>
> Dear Freesurfer experts,
>
> I am trying to run Freesurfer commands (eg. mri_ca_label) using
> Matlab in a Mac computer (macOS High Sierra 10.13.6 version)
> and I'm receiving the following error that I suspect are due to
> library incompatibilities:
>
>
> dyld: lazy symbol binding failed: Symbol not found:
> ___emutls_get_address
> Referenced from:
> /Applications/freesurfer/bin/../lib/gcc/lib/libgomp.1.dylib
> Expected in: /usr/lib/libSystem.B.dylib
>
> dyld: Symbol not found: ___emutls_get_address
> Referenced from:
> /Applications/freesurfer/bin/../lib/gcc/lib/libgomp.1.dylib
> Expected in: /usr/lib/libSystem.B.dylib
>
> mris_ca_label -aseg
> /Applications/freesurfer/subjects/10018/mri/aseg.mgz -seed 1234
> 10018 lh
> /Applications/freesurfer/subjects/10018/surf/lh.sphere.reg
> /Applications/freesurfer/average/lh.curvature.buckner40.filled.desikan_killiany.2010-03-25.gcs
> /Applications/freesurfer/subjects/10018/label/lh.aparc.annot: Aborted
>
> ans =
>
> 134
>
>
>
> I realized that this error has been previously reported
> <https://mail.nmr.mgh.harvard.edu/pipermail/freesurfer/2017-November/054961.html>
> and, as Andrew said, one of the possible solutions could be to
> disable the SIP (System Protection Integrity). I have disabled the
> SIP following the instructions indicated here
> <http://osxdaily.com/2015/10/05/disable-rootless-system-integrity-protection-mac-os-x/>
> but unfortunately Matlab continues giving the same error.
>
>
> How could I solve this problem?. Any help would be appreciated.
>
>
> Thanks in advance.
>
> Best,
>
> --
> *Miguel Ángel Rivas Fernández*
>
>
>
> --
> *Miguel Ángel Rivas Fernández*
>
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https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer--Miguel Ángel Rivas Fernández