Hi Nick,


I tried running mri_watershed on Anthony's computer today and got a
different error from last time.  I got the following error: 


<fontfamily><param>Courier</param>% freesurfer/bin/mri_watershed

dyld: freesurfer/bin/mri_watershed can't open library:
/usr/pubsw/packages/gsl/current/lib/libgsl.0.dylib  (No such file or
directory, errno = 2)

Trace/BPT trap</fontfamily>


So I installed gsl and gsl-shlibs, and I've gotten mri_watershed to
work for me.  I will have Anthony and then another user try it out to
see if installing gsl fixed the issue and let you know.  Thank you.


>Xander


On Apr 4, 2006, at 4:05 PM, Nick Schmansky wrote:


<excerpt>Anthony,


I don't know what to recommend.  I cannot seem to find this symbol

defined anywhere (even Googling it). The panther distribution has
worked

for two other people (that i know of) outside of MGH, so I'm not sure

what I can suggest.  The 'otool' output looks correct.


If I can think of any other debugging techniques to try, I will send

them along.


Nick



On Mon, 2006-04-03 at 14:06 -0500, Anthony Steven Dick wrote:

<excerpt>Hi Nick--


I'm responding on behalf of Xander (our computer tech):


[serge:NL-GCS/subjects/freesurfer_3.0.1] adick% otool -L `which 

mri_watershed`


/Applications/freesurfer/bin//mri_watershed:


/usr/pubsw/packages/gsl/current/lib/libgsl.0.dylib (compatibility 

version 8.0.0, current version 8.0.0)

/usr/pubsw/packages/gsl/current/lib/libgslcblas.0.dylib (compatibility 

version 1.0.0, current version 1.0.0)

/usr/lib/libz.1.dylib (compatibility version 1.0.0, current version
1.2.3)

/usr/lib/libSystem.B.dylib (compatibility version 1.0.0, current
version 

88.1.5)

/usr/lib/libstdc++.6.dylib (compatibility version 7.0.0, current
version 

7.3.0)

/usr/lib/libgcc_s.1.dylib (compatibility version 1.0.0, current
version 

1.0.0)

/usr/lib/libmx.A.dylib (compatibility version 1.0.0, current version
92.0.0)


Anthony



Nick Schmansky wrote:

<excerpt>Can you send me the output of:


 otool -L `which mri_watershed`




On Mon, 2006-04-03 at 13:34 -0500, xmeadow@uchicago.edu wrote:


<excerpt>Hi,


I just downloaded and installed from:


http://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer-Darwin-panther-

stable-pub-v3.0.1-full.dmg


And installed Freesurfer.  Most of the apps have worked without a
problem, 

however mri_watershed yields the following error:


dyld: mri_watershed Undefined symbols:

_acns

Trace/BPT trap


I have redowndloaded the above package and tried to extract
mri_watershed, in 

case I just got a corrupted binary, but each time I do so I get the
same errors.  

My machine is running MAC OS X 10.3.9.  Please let me know if there is
any fix I 

can do for this error?  Thank you very much.

_______________________________________________

Freesurfer mailing list

Freesurfer@nmr.mgh.harvard.edu

https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer




</excerpt>

_______________________________________________

Freesurfer mailing list

Freesurfer@nmr.mgh.harvard.edu

https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer


</excerpt>


</excerpt>

</excerpt>