Hi Carolin

 

Where did you upload the images?
Bruce

 

From: freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edu> On Behalf Of Caroline Chwiesko
Sent: Friday, March 26, 2021 6:08 PM
To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
Subject: Re: [Freesurfer] How to edit GM when WM is ok

 

        External Email - Use Caution        

Hello Bruce,

I wrote a week ago to this mailing list to ask for advice about how to edit an issue where an entire Gyrus will not be captured by the pial surface. I uploaded some images to show what that looks like. I just wanted to send a friendly reminder to make sure it won't be forgotten ;)

Thank you very much for any help!

 

Cheers

Carolin

 

On Fri, Mar 19, 2021 at 4:54 PM Caroline Chwiesko <cchwiesk@uci.edu> wrote:

Hi Bruce,

thank you very much for taking a look at that. I uploaded 3 images in different orientations. I can not see any white matter. 

 

Cheers

Carolin

 

 

On Fri, Mar 19, 2021 at 7:26 AM Fischl, Bruce <BFISCHL@mgh.harvard.edu> wrote:

Hi Carolin

 

Yes, I guess send along images using all 3 orientations. There has to be some white matter there somewhere….

Cheers

Bruce

 

From: freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edu> On Behalf Of Caroline Chwiesko
Sent: Friday, March 19, 2021 12:28 AM
To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
Subject: [Freesurfer] How to edit GM when WM is ok

 

        External Email - Use Caution        

Hello Freesurfer experts,

 

i am doing some editing after recon-all. I have the issue that one gyrus is not captured by the pial  surface. There is no wm that is wrong and that i could correct. It looks like this gyrus has a weird angle so there is actually no WM visible. How can such an error be corrected? I am happy to send a couple images if needed. 

 

Thank you very much in advance for any help!

Cheers

Carolin

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