Dear Freesurfers,

I am having issues with a reconstruction which is giving me giant defects that I cannot correct (see screenshots).

I tried to work on the wm and also to use the command 

recon-all -subject NIMMS02_2year_recon -T2 T2SPACE.nii.gz -T2pial -autorecon3

... to correct using T2 images.

Nothing worked. This never happened to me except this time. 

Any suggestions? 

Thank you a lot,

Vale