Is it possible to run Freesurfer 6.0 recon-all -all on a subject previously processed with 5.3 and have 6 utilise the wm, ctrl pt and pial edits (brainmask.finalsurfs.manedit.mgz) made in the 5.3 output? Would it be ok to run -autorecon2-wm -autorecon3 after renaming aseg.mgz to aseg.presurf.mgz?

Thanks in advance?

Dr Chris Adamson  
Research Officer, Developmental Imaging, Murdoch Childrens Research Institute 
Murdoch Childrens Research Institute 
Royal Children’s Hospital
Flemington Road, Parkville, Victoria  3052, Australia
www.mcri.edu.au

E   chris.adamson@mcri.edu.au
T   03 9936 6780  


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