Hi Rauf,

Can you try adding '-careg' to recon-all command line – “recon-all -autorecon2 -subjid $SUBJECTNAME -careg”?

Best,

Yujing

From: freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edu> On Behalf Of ANWAR Rauf
Sent: Wednesday, December 14, 2022 9:43 AM
To: freesurfer@nmr.mgh.harvard.edu
Subject: [Freesurfer] ERROR: cannot find or read transforms/talairach.m3z

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Hi

I am creating the source model using the tutorial of Fieldtrip. The part of activity involves using freesurfer, I get the error after running the command

recon-all -autorecon2 -subjid $SUBJECTNAME

And the error is given as

reading transform from transforms/talairach.m3z

ERROR: cannot find or read transforms/talairach.m3z

error: No such file or directory

error: transforms/talairach.m3z: could not open transform

I have looked online and mostly people get this error, when they limited RAM, however I have roughly 13 Gb of RAM at my disposal. Any help in this regard will be greatly appreciated.

Thanks

Rauf