Hi all,
I am trying to run tract segmentation on a scan and after running trac-all -prep without errors, trac-all -bedp can't run because it can't find dmri/data. Checking the dir I see a data.nii.gz but it looks like it's a broken link, even though the dwi.nii.gz image (which data.nii.gz should link to in my understanding) is in the folder. I have attached the log which I have skimmed through without seeing any obvious problems. Any help is greatly appreciated,
Thank you,
Michele