#-------------------------------------------- #@# Hippocampal Subfields processing (T1 + T2 volume) left Mon Feb 15 21:57:15 EST 2016 ------------------------------------------ Setting up environment variables --- LD_LIBRARY_PATH is .:/home/kanel/freesurfer/MCRv80/runtime/glnxa64:/home/kanel/freesurfer/MCRv80/bin/glnxa64:/home/kanel/freesurfer/MCRv80/sys/os/glnxa64:/home/kanel/freesurfer/MCRv80/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/home/kanel/freesurfer/MCRv80/sys/java/jre/glnxa64/jre/lib/amd64/server:/home/kanel/freesurfer/MCRv80/sys/java/jre/glnxa64/jre/lib/amd64/client:/home/kanel/freesurfer/MCRv80/sys/java/jre/glnxa64/jre/lib/amd64:/usr/local/cuda/lib64:/usr/lib/x86_64-linux/gnu/cmake/: Warning: application is running on a locale different from the original platform locale. Registering norm.mgz to additional volume makeIsotropic WARNING: not different enough, won't reslice! Done with registration! Registering imageDump.mgz to hippocampal mask from ASEG This file does not contain MRI parameters fixedImageFileName: imageDump.mgz movingImageFileName: /home/kanel/freesurfer/subjects/subject1/tmp/hippoSF_T1T2_v10_T2_left//hippoAmygBinaryMask_autoCropped.mgz degreesOfFreedom: 3 numberOfBins: 20 useDefaultSchedule: 1 initialTranslationMode: 2 extraInputImageFileNames: Initializing the parameters as follows: [0, -0, 0, -55.2319, -86.495, -46.3496, 1, 1, 1, 0, 0, 0] Using fixedShrinkFactors: [4, 4, 4] Shrinking fixed image: 0% 0.999885% 1.99977% 2.99965% 3.99954% 4.99942% 5.99931% 6.99919% 7.99908% 8.99896% 9.99885% 10.9987% 11.9986% 12.9985% 13.9984% 14.9983% 15.9982% 16.998% 17.9979% 18.9978% 19.9977% 20.9976% 21.9975% 22.9973% 23.9972% 24.9971% 25.997% 26.9969% 27.9968% 28.9967% 29.9965% 30.9964% 31.9963% 32.9962% 33.9961% 34.996% 35.9959% 36.9957% 37.9956% 38.9955% 39.9954% 40.9953% 41.9952% 42.995% 43.9949% 44.9948% 45.9947% 46.9946% 47.9945% 48.9944% 49.9942% 50.9941% 51.994% 52.9939% 53.9938% 54.9937% 55.9935% 56.9934% 57.9933% 58.9932% 59.9931% 60.993% 61.9929% 62.9927% 63.9926% 64.9925% 65.9924% 66.9923% 67.9922% 68.9921% 69.9919% 70.9918% 71.9917% 72.9916% 73.9915% 74.9914% 75.9912% 76.9911% 77.991% 78.9909% 79.9908% 80.9907% 81.9906% 82.9904% 83.9903% 84.9902% 85.9901% 86.99% 87.9899% 88.9897% 89.9896% 90.9895% 91.9894% 92.9893% 93.9892% 94.9891% 95.9889% 96.9888% 97.9887% 98.9886% 99.9885% 100% 100% Using movingShrinkFactors: [1, 1, 1] Shrinking moving image: 0% 1% 2% 3% 4% 5% 6% 7% 8% 9% 10% 11% 12% 13% 14% 15% 16% 17% 18% 19% 20% 21% 22% 23% 24% 25% 26% 27% 28% 29% 30% 31% 32% 33% 34% 35% 36% 37% 38% 39% 40% 41% 42% 43% 44% 45% 46% 47% 48% 49% 50% 51% 52% 53% 54% 55% 56% 57% 58% 59% 60% 61% 62% 63% 64% 65% 66% 67% 68% 69% 70% 71% 72% 73% 74% 75% 76% 77% 78% 79% 80% 81% 82% 83% 84% 85% 86% 87% 88% 89% 90% 91% 92% 93% 94% 95% 96% 97% 98% 99% 100% 100% 100% Using fixedSchedule: [4, 4, 4] [1, 1, 1] Using movingSchedule: [4, 4, 4] [1, 1, 1] Using scales: [57.1429, 57.1429, 57.1429, 1, 1, 1, 100, 100, 100, 100, 100, 100] Using parameterOrder: [0, 0, 0, 1, 2, 3, 0, 0, 0, 0, 0, 0] Calculating fixed image pyramid: 0% 50% 100% Calculating moving image pyramid: 0% 50% 100% Doing registration at level 0 of 2 Iteration 0: value = -0.330678 Current position: Rotation: 0 -0 0 Translation: -55.2822 -87.5561 -46.2308 Scaling: 1 1 1 Skewing: 0 0 0 Iteration 1: value = -0.330681 Current position: Rotation: 0 -0 0 Translation: -55.2921 -87.559 -46.2395 Scaling: 1 1 1 Skewing: 0 0 0 Iteration 2: value = -0.330681 Current position: Rotation: 0 -0 0 Translation: -55.2929 -87.559 -46.2395 Scaling: 1 1 1 Skewing: 0 0 0 Iteration 3: value = -0.330681 Current position: Rotation: 0 -0 0 Translation: -55.2929 -87.559 -46.2395 Scaling: 1 1 1 Skewing: 0 0 0 Iteration 4: value = -0.330681 Current position: Rotation: 0 -0 0 Translation: -55.2929 -87.559 -46.2395 Scaling: 1 1 1 Skewing: 0 0 0 PowellOptimizer: Cost function values at the current parameter (-0.330681) and at the local extrema (-0.330681) are within Value Tolerance (0) Doing registration at level 1 of 2 Iteration 0: value = -0.180901 Current position: Rotation: 0 -0 0 Translation: -55.0074 -87.9723 -46.3643 Scaling: 1 1 1 Skewing: 0 0 0 Iteration 1: value = -0.186886 Current position: Rotation: 0 -0 0 Translation: -56.1877 -87.9632 -46.3643 Scaling: 1 1 1 Skewing: 0 0 0 PowellOptimizer: Cost function values at the current parameter (-0.186886) and at the local extrema (-0.186886) are within Value Tolerance (0) Wrote out imageDump_coregistered.mgz $Id: mri_robust_register.cpp,v 1.75 2014/11/18 16:14:42 mreuter Exp $ --mov: Using imageDump.mgz as movable/source volume. --dst: Using /home/kanel/freesurfer/subjects/subject1/tmp/hippoSF_T1T2_v10_T2_left//hippoAmygBinaryMask_autoCropped.mgz as target volume. --lta: Output transform as trash.lta . --mapmovhdr: Will save header adjusted movable as imageDump_coregistered.mgz ! --sat: Using saturation 50 in M-estimator! reading source 'imageDump.mgz'... reading target '/home/kanel/freesurfer/subjects/subject1/tmp/hippoSF_T1T2_v10_T2_left//hippoAmygBinaryMask_autoCropped.mgz'... Registration::setSourceAndTarget(MRI s, MRI t, keeptype = TRUE ) Type Source : 4 Type Target : 3 ensure both FLOAT (3) Reordering axes in mov to better fit dst... ( -1 3 -2 ) MRIreorder() ----------- xdim=-1 ydim=3 zdim=-2 src 131 241 99, 0.250000 0.250000 0.250000 dst 131 99 241, 0.250000 0.250000 0.250000 Writing reordered source as trash-mriS-reorder.mgz Determinant after swap : 0.015625 Mov: (0.25, 0.25, 0.25)mm and dim (131, 99, 241) Dst: (1, 1, 1)mm and dim (40, 30, 61) Asserting both images: 1mm isotropic - reslicing Mov ... -- changing data type from 4 to 3 (noscale = 0)... -- Original : (0.25, 0.25, 0.25)mm and (131, 99, 241) voxels. -- Resampled: (1, 1, 1)mm and (40, 30, 61) voxels. -- Reslicing using cubic bspline MRItoBSpline degree 3 - no Dst reslice necessary Registration::computeMultiresRegistration - computing centroids - computing initial transform -- using translation info - Get Gaussian Pyramid Limits ( min size: 16 max size: -1 ) - Build Gaussian Pyramid ( Limits min steps: 0 max steps: 0 ) - Build Gaussian Pyramid ( Limits min steps: 0 max steps: 0 ) - initial transform: Ti = [ ... 1.0000000000000 0 0 0.4617522435512 0 1.0000000000000 0 0.8046697844867 0 0 1.0000000000000 -0.1751411033521 0 0 0 1.0000000000000 ] - initial iscale: Ii =1 Resolution: 0 S( 40 30 61 ) T( 40 30 61 ) Iteration(f): 1 -- diff. to prev. transform: 10.8594 Iteration(f): 2 -- diff. to prev. transform: 3.35037 Iteration(f): 3 -- diff. to prev. transform: 0.868198 Iteration(f): 4 -- diff. to prev. transform: 0.463969 Iteration(f): 5 -- diff. to prev. transform: 0.275657 max it: 5 reached! - final transform: Tf = [ ... 0.9809649984131 -0.1639694766199 -0.1040273167271 8.0747010719851 0.1664798633844 0.9859171849771 0.0158669295847 -2.4655963258958 0.0999606271288 -0.0328833560318 0.9944478658633 -2.2592512532149 0 0 0 1.0000000000000 ] - final iscale: If = 1 ********************************************************** * * WARNING: Registration did not converge in 5 steps! * Problem might be ill posed. * Please inspect output manually! * ********************************************************** Final Transform: Adjusting final transform due to initial resampling (voxel or size changes) ... M = [ ... -0.2452412496033 -0.0260068291818 0.0409923691550 39.0253793425688 -0.0416199658461 0.0039667323962 -0.2464792962443 30.2974424799618 -0.0249901567822 0.2486119664658 0.0082208390080 0.8327833191470 0 0 0 1.0000000000000 ] Determinant : -0.015625 writing output transformation to trash.lta ... converting VOX to RAS and saving RAS2RAS... mapmovhdr: Changing vox2ras MOV header (to map to DST) ... To check aligned result, run: freeview -v /home/kanel/freesurfer/subjects/subject1/tmp/hippoSF_T1T2_v10_T2_left//hippoAmygBinaryMask_autoCropped.mgz imageDump_coregistered.mgz Registration took 0 minutes and 1 seconds. Thank you for using RobustRegister! If you find it useful and use it for a publication, please cite: Highly Accurate Inverse Consistent Registration: A Robust Approach M. Reuter, H.D. Rosas, B. Fischl. NeuroImage 53(4):1181-1196, 2010. http://dx.doi.org/10.1016/j.neuroimage.2010.07.020 http://reuter.mit.edu/papers/reuter-robreg10.pdf $Id: mri_robust_register.cpp,v 1.75 2014/11/18 16:14:42 mreuter Exp $ --mov: Using imageDump.mgz as movable/source volume. --dst: Using /home/kanel/freesurfer/subjects/subject1/tmp/hippoSF_T1T2_v10_T2_left//hippoAmygBinaryMask_autoCropped.mgz as target volume. --lta: Output transform as trash.lta . --mapmovhdr: Will save header adjusted movable as imageDump_coregistered.mgz ! --affine: Enableing affine transform! --sat: Using saturation 50 in M-estimator! reading source 'imageDump.mgz'... reading target '/home/kanel/freesurfer/subjects/subject1/tmp/hippoSF_T1T2_v10_T2_left//hippoAmygBinaryMask_autoCropped.mgz'... Registration::setSourceAndTarget(MRI s, MRI t, keeptype = TRUE ) Type Source : 4 Type Target : 3 ensure both FLOAT (3) Reordering axes in mov to better fit dst... ( -1 3 -2 ) MRIreorder() ----------- xdim=-1 ydim=3 zdim=-2 src 131 241 99, 0.250000 0.250000 0.250000 dst 131 99 241, 0.250000 0.250000 0.250000 Writing reordered source as trash-mriS-reorder.mgz Determinant after swap : 0.015625 Mov: (0.25, 0.25, 0.25)mm and dim (131, 99, 241) Dst: (1, 1, 1)mm and dim (40, 30, 61) Asserting both images: 1mm isotropic - reslicing Mov ... -- changing data type from 4 to 3 (noscale = 0)... -- Original : (0.25, 0.25, 0.25)mm and (131, 99, 241) voxels. -- Resampled: (1, 1, 1)mm and (40, 30, 61) voxels. -- Reslicing using cubic bspline MRItoBSpline degree 3 - no Dst reslice necessary Registration::computeMultiresRegistration - computing centroids - computing initial transform -- using translation info - Get Gaussian Pyramid Limits ( min size: 16 max size: -1 ) - Build Gaussian Pyramid ( Limits min steps: 0 max steps: 0 ) - Build Gaussian Pyramid ( Limits min steps: 0 max steps: 0 ) - initial transform: Ti = [ ... 1.0000000000000 0 0 0.4617550364080 0 1.0000000000000 0 0.8046693464640 0 0 1.0000000000000 -0.1751379729987 0 0 0 1.0000000000000 ] - initial iscale: Ii =1 Resolution: 0 S( 40 30 61 ) T( 40 30 61 ) Iteration(f): 1 -- diff. to prev. transform: 16.9902 Iteration(f): 2 -- diff. to prev. transform: 5.20397 Iteration(f): 3 -- diff. to prev. transform: 2.13042 Iteration(f): 4 -- diff. to prev. transform: 0.857205 Iteration(f): 5 -- diff. to prev. transform: 0.492616 max it: 5 reached! - final transform: Tf = [ ... 1.2022951070679 -0.1437325117416 -0.0396947065809 0.4999796926857 0.2209300031542 1.1627706727290 0.0550177827433 -7.9782487523724 0.1072254679578 0.1644902413445 0.9916173998881 -5.3204381902231 0 0 0 1.0000000000000 ] - final iscale: If = 1 ********************************************************** * * WARNING: Registration did not converge in 5 steps! * Problem might be ill posed. * Please inspect output manually! * ********************************************************** Final Transform: Adjusting final transform due to initial resampling (voxel or size changes) ... M = [ ... -0.3005737039505 -0.0099236739859 0.0359331279354 40.0192510124159 -0.0552324963987 0.0137544461745 -0.2906926681823 31.5636361880453 -0.0268063639018 0.2479043502092 -0.0411225603361 3.3867286938740 0 0 0 1.0000000000000 ] Determinant : -0.0220241 Decompose into Rot * Shear * Scale : Rot = [ ... -0.9869902974229 -0.0537419051671 0.1515320442087 -0.1485514373092 -0.0557097460588 -0.9873342365519 -0.0615030346117 0.9969996147557 -0.0470015415756 ] Shear = [ ... 1.0000000000000 -0.0303552238688 0.0348054406378 -0.0244539319081 1.0000000000000 -0.0908182949183 0.0334282655745 -0.1082741524806 1.0000000000000 ] Scale = diag([ 0.3065168689127 0.2469276020975 0.2943886676711 ]) writing output transformation to trash.lta ... converting VOX to RAS and saving RAS2RAS... mapmovhdr: Changing vox2ras MOV header (to map to DST) ... To check aligned result, run: freeview -v /home/kanel/freesurfer/subjects/subject1/tmp/hippoSF_T1T2_v10_T2_left//hippoAmygBinaryMask_autoCropped.mgz imageDump_coregistered.mgz Registration took 0 minutes and 1 seconds. Thank you for using RobustRegister! If you find it useful and use it for a publication, please cite: Highly Accurate Inverse Consistent Registration: A Robust Approach M. Reuter, H.D. Rosas, B. Fischl. NeuroImage 53(4):1181-1196, 2010. http://dx.doi.org/10.1016/j.neuroimage.2010.07.020 http://reuter.mit.edu/papers/reuter-robreg10.pdf Reading contexts of file /home/kanel/freesurfer/average/HippoSF/atlas/compressionLookupTable.txt Constructing image-to-world transform from header information (asegMod.mgz) Returning the following transform: AffineTransform (0x7f3e2c74d0b0) RTTI typeinfo: itk::AffineTransform Reference Count: 1 Modified Time: 399 Debug: Off Observers: none Matrix: -1 0 0 0 0 1 0 -1 0 Offset: [126.722, -132.586, 104.949] Center: [0, 0, 0] Translation: [126.722, -132.586, 104.949] Inverse: -1 0 0 0 0 -1 0 1 0 Singular: 0 Constructing image-to-world transform from header information (/home/kanel/freesurfer/subjects/subject1/tmp/hippoSF_T1T2_v10_T2_left/imageDump.mgz) Returning the following transform: AffineTransform (0x7f3e2c74d0b0) RTTI typeinfo: itk::AffineTransform Reference Count: 1 Modified Time: 550 Debug: Off Observers: none Matrix: 0.300574 0.00992368 -0.0359331 -0.0268064 0.247904 -0.0411226 0.0552325 -0.0137544 0.290693 Offset: [-42.2972, -53.1995, -37.6145] Center: [0, 0, 0] Translation: [-42.2972, -53.1995, -37.6145] Inverse: 3.24637 -0.10854 0.385936 0.250685 4.05734 0.604956 -0.604959 0.212601 3.39535 Singular: 0 Transform before cropping: AffineTransform (0x7f3e2c74d0b0) RTTI typeinfo: itk::AffineTransform Reference Count: 1 Modified Time: 552 Debug: Off Observers: none Matrix: -0.300574 -0.00992368 0.0359331 -0.0552325 0.0137544 -0.290693 -0.0268064 0.247904 -0.0411226 Offset: [169.019, 142.564, 79.3867] Center: [0, 0, 0] Translation: [169.019, 142.564, 79.3867] Inverse: -3.24637 -0.385936 -0.10854 -0.250685 -0.604956 4.05734 0.604959 -3.39535 0.212601 Singular: 0 WorldToImageTransform before cropping: AffineTransform (0x7f3e2c73c0e0) RTTI typeinfo: itk::AffineTransform Reference Count: 1 Modified Time: 554 Debug: Off Observers: none Matrix: -1 0 0 0 0 -1 0 1 0 Offset: [126.722, 104.949, 132.586] Center: [0, 0, 0] Translation: [126.722, 104.949, 132.586] Inverse: -1 0 0 0 0 1 0 -1 0 Singular: 0 m_BoundingBoxSize: [131, 241,99] minimalMappedCoordinate: [127.563, 106.896,71.8719] maximalMappedCoordinate: [172.541, 145.865,138.884] Cropping with min [123 102 65] and max [177 150 145] m_OriginalImageRegion before checking margins: ImageRegion (0x7f3e2e359760) Dimension: 3 Index: [123, 102, 65] Size: [55, 49, 81] m_CroppedImageRegion before checking margins: ImageRegion (0x7f3e2e359728) Dimension: 3 Index: [0, 0, 0] Size: [55, 49, 81] m_OriginalImageRegion after checking margins: ImageRegion (0x7f3e2e359760) Dimension: 3 Index: [123, 102, 65] Size: [55, 49, 81] m_CroppedImageRegion after checking margins: ImageRegion (0x7f3e2e359728) Dimension: 3 Index: [0, 0, 0] Size: [55, 49, 81] Transform after cropping: AffineTransform (0x7f3e2c74d0b0) RTTI typeinfo: itk::AffineTransform Reference Count: 1 Modified Time: 706 Debug: Off Observers: none Matrix: -0.300574 -0.00992368 0.0359331 -0.0552325 0.0137544 -0.290693 -0.0268064 0.247904 -0.0411226 Offset: [46.0193, 40.5636, 14.3867] Center: [0, 0, 0] Translation: [46.0193, 40.5636, 14.3867] Inverse: -3.24637 -0.385936 -0.10854 -0.250685 -0.604956 4.05734 0.604959 -3.39535 0.212601 Singular: 0 WorldToImageTransform after cropping: AffineTransform (0x7f3e2c73c0e0) RTTI typeinfo: itk::AffineTransform Reference Count: 1 Modified Time: 707 Debug: Off Observers: none Matrix: -1 0 0 0 0 -1 0 1 0 Offset: [3.72204, 2.94915, 67.5862] Center: [0, 0, 0] Translation: [3.72204, 2.94915, 67.5862] Inverse: -1 0 0 0 0 1 0 -1 0 Singular: 0 Transforming points Transforming points Warning: This concatenation operation includes an empty array with an incorrect number of rows. Concatenation including empty arrays will require all arrays to have the same number of rows in a future release. [> In segmentSubjectT1T2_autoEstimateAlveusML at 474] Reading contexts of file /home/kanel/freesurfer/average/HippoSF/atlas/compressionLookupTable.txt -------------- Making Left-Amygdala map to reduced label 1 -------------- Making alveus map to reduced label 2 Making subiculum map to reduced label 2 Making Hippocampal_tail map to reduced label 2 Making molecular_layer_HP map to reduced label 2 Making GC-ML-DG map to reduced label 2 Making CA4 map to reduced label 2 Making CA1 map to reduced label 2 Making CA3 map to reduced label 2 Making HATA map to reduced label 2 Making fimbria map to reduced label 2 Making presubiculum map to reduced label 2 Making parasubiculum map to reduced label 2 Making hippocampal-fissure map to reduced label 2 -------------- Making Left-Cerebral-Cortex map to reduced label 3 -------------- Making Left-Cerebral-White-Matter map to reduced label 4 -------------- Making Left-Lateral-Ventricle map to reduced label 5 -------------- Making Left-choroid-plexus map to reduced label 6 -------------- Making Unknown map to reduced label 7 -------------- Making Left-VentralDC map to reduced label 8 -------------- Making Left-Putamen map to reduced label 9 -------------- Making Left-Pallidum map to reduced label 10 -------------- Making Left-Thalamus-Proper map to reduced label 11 -------------- Making Left-Accumbens-area map to reduced label 12 -------------- Making Left-Caudate map to reduced label 13 Smoothing mesh collection with kernel size 2.000000 ...Smoothing class: 0 Smoothing class: 1 Smoothing class: 2 Smoothing class: 3 Smoothing class: 4 Smoothing class: 5 Smoothing class: 6 Smoothing class: 7 Smoothing class: 8 Smoothing class: 9 Smoothing class: 10 Smoothing class: 11 Smoothing class: 12 done numberOfImages = 1 Image: 4 numberOfClasses = 13 numberOfImages = 1 precisions[0][0][0] = 100.000000 precisions[0][0][1] = 100.000000 precisions[0][0][2] = 100.000000 precisions[0][0][3] = 100.000000 precisions[0][0][4] = 100.000000 precisions[0][0][5] = 100.000000 precisions[0][0][6] = 100.000000 precisions[0][0][7] = 100.000000 precisions[0][0][8] = 100.000000 precisions[0][0][9] = 100.000000 precisions[0][0][10] = 100.000000 precisions[0][0][11] = 100.000000 precisions[0][0][12] = 100.000000 means[0][0] = 18.000000 means[0][1] = 17.000000 means[0][2] = 3.000000 means[0][3] = 2.000000 means[0][4] = 4.000000 means[0][5] = 31.000000 means[0][6] = 1.000000 means[0][7] = 28.000000 means[0][8] = 12.000000 means[0][9] = 13.000000 means[0][10] = 10.000000 means[0][11] = 26.000000 means[0][12] = 11.000000 Resolution 1, iteration 1 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.5 voxels in 1.6394 seconds minLogLikelihoodTimesPrior = -2.4194e+04 Resolution 1, iteration 2 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.58062 voxels in 1.1313 seconds minLogLikelihoodTimesPrior = -2.4604e+04 Resolution 1, iteration 3 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.58939 voxels in 0.82897 seconds minLogLikelihoodTimesPrior = -2.4962e+04 Resolution 1, iteration 4 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.22386 voxels in 0.87561 seconds minLogLikelihoodTimesPrior = -2.5107e+04 Resolution 1, iteration 5 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.23142 voxels in 0.75246 seconds minLogLikelihoodTimesPrior = -2.5345e+04 Resolution 1, iteration 6 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.11972 voxels in 1.799 seconds minLogLikelihoodTimesPrior = -2.5384e+04 Resolution 1, iteration 7 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.15188 voxels in 0.70947 seconds minLogLikelihoodTimesPrior = -2.5439e+04 Resolution 1, iteration 8 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.25501 voxels in 0.72292 seconds minLogLikelihoodTimesPrior = -2.5517e+04 Resolution 1, iteration 9 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.21765 voxels in 0.75299 seconds minLogLikelihoodTimesPrior = -2.5661e+04 Resolution 1, iteration 10 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.26578 voxels in 0.75269 seconds minLogLikelihoodTimesPrior = -2.5923e+04 Resolution 1, iteration 11 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.29811 voxels in 1.0803 seconds minLogLikelihoodTimesPrior = -2.6152e+04 Resolution 1, iteration 12 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.47533 voxels in 0.85128 seconds minLogLikelihoodTimesPrior = -2.6349e+04 Resolution 1, iteration 13 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.26465 voxels in 0.96461 seconds minLogLikelihoodTimesPrior = -2.6526e+04 Resolution 1, iteration 14 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.055934 voxels in 2.0753 seconds minLogLikelihoodTimesPrior = -2.6567e+04 Resolution 1, iteration 15 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.1906 voxels in 0.73261 seconds minLogLikelihoodTimesPrior = -2.6636e+04 Resolution 1, iteration 16 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.31056 voxels in 0.75617 seconds minLogLikelihoodTimesPrior = -2.6756e+04 Resolution 1, iteration 17 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.13298 voxels in 1.6448 seconds minLogLikelihoodTimesPrior = -2.6784e+04 Resolution 1, iteration 18 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.028357 voxels in 1.9295 seconds minLogLikelihoodTimesPrior = -2.6791e+04 Resolution 1, iteration 19 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.0042891 voxels in 0.78139 seconds minLogLikelihoodTimesPrior = -2.6802e+04 Resolution 1, iteration 20 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.010453 voxels in 0.78521 seconds minLogLikelihoodTimesPrior = -2.6815e+04 Resolution 1, iteration 21 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.0066601 voxels in 3.0284 seconds minLogLikelihoodTimesPrior = -2.6815e+04 Resolution 1, iteration 22 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.00081976 voxels in 0.76658 seconds minLogLikelihoodTimesPrior = -2.6816e+04 Resolution 1, iteration 23 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.0019619 voxels in 0.78358 seconds minLogLikelihoodTimesPrior = -2.6817e+04 Resolution 1, iteration 24 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.0081124 voxels in 0.75003 seconds minLogLikelihoodTimesPrior = -2.6819e+04 Resolution 1, iteration 25 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.006576 voxels in 0.75461 seconds minLogLikelihoodTimesPrior = -2.6821e+04 Resolution 1, iteration 26 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.017126 voxels in 0.78754 seconds minLogLikelihoodTimesPrior = -2.6825e+04 Resolution 1, iteration 27 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.024007 voxels in 0.77725 seconds minLogLikelihoodTimesPrior = -2.6830e+04 Resolution 1, iteration 28 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.02559 voxels in 0.76442 seconds minLogLikelihoodTimesPrior = -2.6839e+04 Resolution 1, iteration 29 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.0423 voxels in 0.73399 seconds minLogLikelihoodTimesPrior = -2.6855e+04 Resolution 1, iteration 30 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.10801 voxels in 1.5968 seconds minLogLikelihoodTimesPrior = -2.6860e+04 Resolution 1, iteration 31 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.033299 voxels in 0.76599 seconds minLogLikelihoodTimesPrior = -2.6870e+04 Resolution 1, iteration 32 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.053747 voxels in 1.5379 seconds minLogLikelihoodTimesPrior = -2.6877e+04 Resolution 1, iteration 33 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.024052 voxels in 0.74513 seconds minLogLikelihoodTimesPrior = -2.6893e+04 Resolution 1, iteration 34 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.050913 voxels in 0.76019 seconds minLogLikelihoodTimesPrior = -2.6926e+04 Resolution 1, iteration 35 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.10969 voxels in 0.77773 seconds minLogLikelihoodTimesPrior = -2.6987e+04 Resolution 1, iteration 36 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.30476 voxels in 1.2438 seconds minLogLikelihoodTimesPrior = -2.7033e+04 Resolution 1, iteration 37 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.083644 voxels in 0.74549 seconds minLogLikelihoodTimesPrior = -2.7120e+04 Resolution 1, iteration 38 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.085821 voxels in 1.2417 seconds minLogLikelihoodTimesPrior = -2.7203e+04 Resolution 1, iteration 39 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.14136 voxels in 0.7878 seconds minLogLikelihoodTimesPrior = -2.7354e+04 Resolution 1, iteration 40 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.48542 voxels in 0.79456 seconds minLogLikelihoodTimesPrior = -2.7622e+04 Resolution 1, iteration 41 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.16951 voxels in 1.2795 seconds minLogLikelihoodTimesPrior = -2.7739e+04 Resolution 1, iteration 42 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.35473 voxels in 1.2622 seconds minLogLikelihoodTimesPrior = -2.7835e+04 Resolution 1, iteration 43 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.1188 voxels in 1.3102 seconds minLogLikelihoodTimesPrior = -2.7881e+04 Resolution 1, iteration 44 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.047174 voxels in 1.4725 seconds minLogLikelihoodTimesPrior = -2.7902e+04 Resolution 1, iteration 45 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.082377 voxels in 0.75502 seconds minLogLikelihoodTimesPrior = -2.7937e+04 Resolution 1, iteration 46 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.11765 voxels in 0.74611 seconds minLogLikelihoodTimesPrior = -2.7993e+04 Resolution 1, iteration 47 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.16336 voxels in 0.77098 seconds minLogLikelihoodTimesPrior = -2.8086e+04 Resolution 1, iteration 48 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.13231 voxels in 0.81162 seconds minLogLikelihoodTimesPrior = -2.8170e+04 Resolution 1, iteration 49 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.15018 voxels in 1.16 seconds minLogLikelihoodTimesPrior = -2.8228e+04 Resolution 1, iteration 50 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.05181 voxels in 1.6652 seconds minLogLikelihoodTimesPrior = -2.8250e+04 Resolution 1, iteration 51 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.022098 voxels in 1.5449 seconds minLogLikelihoodTimesPrior = -2.8255e+04 Resolution 1, iteration 52 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.019254 voxels in 0.72601 seconds minLogLikelihoodTimesPrior = -2.8262e+04 Resolution 1, iteration 53 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.0077201 voxels in 2.3152 seconds minLogLikelihoodTimesPrior = -2.8263e+04 Resolution 1, iteration 54 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.0034792 voxels in 0.77936 seconds minLogLikelihoodTimesPrior = -2.8264e+04 Resolution 1, iteration 55 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.0058094 voxels in 0.76806 seconds minLogLikelihoodTimesPrior = -2.8265e+04 Resolution 1, iteration 56 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.0025998 voxels in 0.79319 seconds minLogLikelihoodTimesPrior = -2.8267e+04 Resolution 1, iteration 57 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.012141 voxels in 0.76545 seconds minLogLikelihoodTimesPrior = -2.8269e+04 Resolution 1, iteration 58 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.011654 voxels in 0.78578 seconds minLogLikelihoodTimesPrior = -2.8272e+04 Resolution 1, iteration 59 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.015485 voxels in 0.79545 seconds minLogLikelihoodTimesPrior = -2.8278e+04 Resolution 1, iteration 60 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.074782 voxels in 0.77 seconds minLogLikelihoodTimesPrior = -2.8287e+04 Resolution 1, iteration 61 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.026635 voxels in 0.75562 seconds minLogLikelihoodTimesPrior = -2.8304e+04 Resolution 1, iteration 62 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.082396 voxels in 0.7484 seconds minLogLikelihoodTimesPrior = -2.8335e+04 Resolution 1, iteration 63 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.15593 voxels in 0.79643 seconds minLogLikelihoodTimesPrior = -2.8392e+04 Resolution 1, iteration 64 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.10993 voxels in 1.241 seconds minLogLikelihoodTimesPrior = -2.8444e+04 Resolution 1, iteration 65 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.19789 voxels in 0.76038 seconds minLogLikelihoodTimesPrior = -2.8535e+04 Resolution 1, iteration 66 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.30915 voxels in 0.95199 seconds minLogLikelihoodTimesPrior = -2.8558e+04 Resolution 1, iteration 67 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.12364 voxels in 0.77774 seconds minLogLikelihoodTimesPrior = -2.8599e+04 Resolution 1, iteration 68 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.2623 voxels in 0.76781 seconds minLogLikelihoodTimesPrior = -2.8672e+04 Resolution 1, iteration 69 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.084307 voxels in 1.5757 seconds minLogLikelihoodTimesPrior = -2.8706e+04 Resolution 1, iteration 70 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.09431 voxels in 0.77202 seconds minLogLikelihoodTimesPrior = -2.8768e+04 Resolution 1, iteration 71 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.077772 voxels in 1.3131 seconds minLogLikelihoodTimesPrior = -2.8825e+04 Resolution 1, iteration 72 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.088957 voxels in 1.398 seconds minLogLikelihoodTimesPrior = -2.8885e+04 Resolution 1, iteration 73 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.23147 voxels in 0.7699 seconds minLogLikelihoodTimesPrior = -2.8986e+04 Resolution 1, iteration 74 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.1896 voxels in 0.7915 seconds minLogLikelihoodTimesPrior = -2.9061e+04 Resolution 1, iteration 75 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.19384 voxels in 1.1915 seconds minLogLikelihoodTimesPrior = -2.9123e+04 Resolution 1, iteration 76 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.13354 voxels in 1.0438 seconds minLogLikelihoodTimesPrior = -2.9173e+04 Resolution 1, iteration 77 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.12123 voxels in 1.3302 seconds minLogLikelihoodTimesPrior = -2.9193e+04 Resolution 1, iteration 78 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.085718 voxels in 0.78599 seconds minLogLikelihoodTimesPrior = -2.9228e+04 Resolution 1, iteration 79 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.084731 voxels in 1.2958 seconds minLogLikelihoodTimesPrior = -2.9257e+04 Resolution 1, iteration 80 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.14786 voxels in 0.76366 seconds minLogLikelihoodTimesPrior = -2.9303e+04 Resolution 1, iteration 81 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.10518 voxels in 0.80725 seconds minLogLikelihoodTimesPrior = -2.9342e+04 Resolution 1, iteration 82 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.12088 voxels in 1.214 seconds minLogLikelihoodTimesPrior = -2.9364e+04 Resolution 1, iteration 83 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.066609 voxels in 1.2338 seconds minLogLikelihoodTimesPrior = -2.9381e+04 Resolution 1, iteration 84 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.0070176 voxels in 0.75724 seconds minLogLikelihoodTimesPrior = -2.9387e+04 Resolution 1, iteration 85 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.0759 voxels in 0.65801 seconds minLogLikelihoodTimesPrior = -2.9393e+04 Resolution 1, iteration 86 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.094614 voxels in 0.63548 seconds minLogLikelihoodTimesPrior = -2.9397e+04 Resolution 1, iteration 87 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.030287 voxels in 0.62425 seconds minLogLikelihoodTimesPrior = -2.9405e+04 Resolution 1, iteration 88 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.053431 voxels in 0.63191 seconds minLogLikelihoodTimesPrior = -2.9419e+04 Resolution 1, iteration 89 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.039015 voxels in 1.0124 seconds minLogLikelihoodTimesPrior = -2.9432e+04 Resolution 1, iteration 90 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.026664 voxels in 1.2009 seconds minLogLikelihoodTimesPrior = -2.9443e+04 Resolution 1, iteration 91 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.051481 voxels in 0.6428 seconds minLogLikelihoodTimesPrior = -2.9462e+04 Resolution 1, iteration 92 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.043754 voxels in 0.88332 seconds minLogLikelihoodTimesPrior = -2.9479e+04 Resolution 1, iteration 93 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.058507 voxels in 0.62859 seconds minLogLikelihoodTimesPrior = -2.9505e+04 Resolution 1, iteration 94 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.13264 voxels in 0.62525 seconds minLogLikelihoodTimesPrior = -2.9549e+04 Resolution 1, iteration 95 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.10221 voxels in 0.64726 seconds minLogLikelihoodTimesPrior = -2.9585e+04 Resolution 1, iteration 96 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.092829 voxels in 0.65427 seconds minLogLikelihoodTimesPrior = -2.9613e+04 Resolution 1, iteration 97 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.11216 voxels in 0.66972 seconds minLogLikelihoodTimesPrior = -2.9633e+04 Resolution 1, iteration 98 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.082585 voxels in 0.89413 seconds minLogLikelihoodTimesPrior = -2.9648e+04 Resolution 1, iteration 99 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.072641 voxels in 0.61847 seconds minLogLikelihoodTimesPrior = -2.9650e+04 Resolution 1, iteration 100 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.02722 voxels in 0.62713 seconds minLogLikelihoodTimesPrior = -2.9654e+04 Resolution 1, iteration 101 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.034812 voxels in 0.62382 seconds minLogLikelihoodTimesPrior = -2.9660e+04 Resolution 1, iteration 102 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.057786 voxels in 0.65037 seconds minLogLikelihoodTimesPrior = -2.9671e+04 Resolution 1, iteration 103 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.079713 voxels in 0.62067 seconds minLogLikelihoodTimesPrior = -2.9687e+04 Resolution 1, iteration 104 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.086928 voxels in 0.63036 seconds minLogLikelihoodTimesPrior = -2.9713e+04 Resolution 1, iteration 105 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.099635 voxels in 0.70716 seconds minLogLikelihoodTimesPrior = -2.9734e+04 Resolution 1, iteration 106 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.066899 voxels in 1.0551 seconds minLogLikelihoodTimesPrior = -2.9750e+04 Resolution 1, iteration 107 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.092375 voxels in 1.0507 seconds minLogLikelihoodTimesPrior = -2.9758e+04 Resolution 1, iteration 108 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.1112 voxels in 0.64054 seconds minLogLikelihoodTimesPrior = -2.9768e+04 Resolution 1, iteration 109 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.12399 voxels in 0.69767 seconds minLogLikelihoodTimesPrior = -2.9778e+04 Resolution 1, iteration 110 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.10191 voxels in 0.63438 seconds minLogLikelihoodTimesPrior = -2.9793e+04 Resolution 1, iteration 111 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.056632 voxels in 0.77837 seconds minLogLikelihoodTimesPrior = -2.9803e+04 Resolution 1, iteration 112 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.049409 voxels in 0.62089 seconds minLogLikelihoodTimesPrior = -2.9820e+04 Resolution 1, iteration 113 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.0291 voxels in 1.4012 seconds minLogLikelihoodTimesPrior = -2.9827e+04 Resolution 1, iteration 114 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.068866 voxels in 0.68869 seconds minLogLikelihoodTimesPrior = -2.9836e+04 Resolution 1, iteration 115 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.095356 voxels in 0.6507 seconds minLogLikelihoodTimesPrior = -2.9848e+04 Resolution 1, iteration 116 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.062529 voxels in 1.1721 seconds minLogLikelihoodTimesPrior = -2.9856e+04 Resolution 1, iteration 117 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.088472 voxels in 0.68033 seconds minLogLikelihoodTimesPrior = -2.9866e+04 Resolution 1, iteration 118 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.14021 voxels in 0.64192 seconds minLogLikelihoodTimesPrior = -2.9867e+04 Resolution 1, iteration 119 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.016008 voxels in 0.62763 seconds minLogLikelihoodTimesPrior = -2.9868e+04 Resolution 1, iteration 120 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.0020535 voxels in 0.62067 seconds minLogLikelihoodTimesPrior = -2.9870e+04 Resolution 1, iteration 121 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.026251 voxels in 0.652 seconds minLogLikelihoodTimesPrior = -2.9873e+04 Resolution 1, iteration 122 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.015955 voxels in 0.65636 seconds minLogLikelihoodTimesPrior = -2.9874e+04 Resolution 1, iteration 123 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.0093813 voxels in 0.6039 seconds minLogLikelihoodTimesPrior = -2.9875e+04 Resolution 1, iteration 124 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.01617 voxels in 0.60502 seconds minLogLikelihoodTimesPrior = -2.9877e+04 Resolution 1, iteration 125 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.025779 voxels in 0.6324 seconds minLogLikelihoodTimesPrior = -2.9881e+04 Resolution 1, iteration 126 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.042045 voxels in 0.64673 seconds minLogLikelihoodTimesPrior = -2.9888e+04 Resolution 1, iteration 127 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.027949 voxels in 0.65445 seconds minLogLikelihoodTimesPrior = -2.9894e+04 Resolution 1, iteration 128 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.048713 voxels in 0.60905 seconds minLogLikelihoodTimesPrior = -2.9903e+04 Resolution 1, iteration 129 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.066905 voxels in 0.62329 seconds minLogLikelihoodTimesPrior = -2.9919e+04 Resolution 1, iteration 130 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.084552 voxels in 0.64656 seconds minLogLikelihoodTimesPrior = -2.9940e+04 Resolution 1, iteration 131 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.014459 voxels in 1.8916 seconds minLogLikelihoodTimesPrior = -2.9944e+04 Resolution 1, iteration 132 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.0057184 voxels in 1.8323 seconds minLogLikelihoodTimesPrior = -2.9944e+04 Resolution 1, iteration 133 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.0035385 voxels in 0.64368 seconds minLogLikelihoodTimesPrior = -2.9945e+04 Resolution 1, iteration 134 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.0022627 voxels in 1.8543 seconds minLogLikelihoodTimesPrior = -2.9946e+04 Resolution 1, iteration 135 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.0011912 voxels in 0.62196 seconds minLogLikelihoodTimesPrior = -2.9946e+04 Resolution 1, iteration 136 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.0018869 voxels in 1.8501 seconds minLogLikelihoodTimesPrior = -2.9946e+04 Resolution 1, iteration 137 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.00026678 voxels in 0.65243 seconds minLogLikelihoodTimesPrior = -2.9946e+04 Resolution 1, iteration 138 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.00089886 voxels in 0.63858 seconds minLogLikelihoodTimesPrior = -2.9946e+04 Resolution 1, iteration 139 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.002188 voxels in 0.61076 seconds minLogLikelihoodTimesPrior = -2.9947e+04 Resolution 1, iteration 140 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.0033237 voxels in 0.61602 seconds minLogLikelihoodTimesPrior = -2.9947e+04 Resolution 1, iteration 141 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.0073128 voxels in 0.65772 seconds minLogLikelihoodTimesPrior = -2.9948e+04 Resolution 1, iteration 142 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.011476 voxels in 0.63631 seconds minLogLikelihoodTimesPrior = -2.9949e+04 Resolution 1, iteration 143 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.014207 voxels in 0.6146 seconds minLogLikelihoodTimesPrior = -2.9951e+04 Resolution 1, iteration 144 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.026469 voxels in 0.62634 seconds minLogLikelihoodTimesPrior = -2.9954e+04 Resolution 1, iteration 145 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.040382 voxels in 0.642 seconds minLogLikelihoodTimesPrior = -2.9958e+04 Resolution 1, iteration 146 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.07421 voxels in 0.61774 seconds minLogLikelihoodTimesPrior = -2.9963e+04 Resolution 1, iteration 147 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.10216 voxels in 0.61533 seconds minLogLikelihoodTimesPrior = -2.9970e+04 Resolution 1, iteration 148 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.12006 voxels in 0.60133 seconds minLogLikelihoodTimesPrior = -2.9980e+04 Resolution 1, iteration 149 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.19664 voxels in 0.66404 seconds minLogLikelihoodTimesPrior = -2.9998e+04 Resolution 1, iteration 150 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.12372 voxels in 0.79212 seconds minLogLikelihoodTimesPrior = -3.0013e+04 Resolution 1, iteration 151 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.13707 voxels in 0.62677 seconds minLogLikelihoodTimesPrior = -3.0036e+04 Resolution 1, iteration 152 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.10389 voxels in 1.0274 seconds minLogLikelihoodTimesPrior = -3.0051e+04 Resolution 1, iteration 153 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.080379 voxels in 0.91145 seconds minLogLikelihoodTimesPrior = -3.0062e+04 Resolution 1, iteration 154 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.078023 voxels in 0.65182 seconds minLogLikelihoodTimesPrior = -3.0076e+04 Resolution 1, iteration 155 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.14367 voxels in 0.89348 seconds minLogLikelihoodTimesPrior = -3.0076e+04 Resolution 1, iteration 156 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.0020479 voxels in 0.62526 seconds minLogLikelihoodTimesPrior = -3.0077e+04 Resolution 1, iteration 157 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.0035335 voxels in 0.61718 seconds minLogLikelihoodTimesPrior = -3.0078e+04 Resolution 1, iteration 158 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.0079526 voxels in 0.65637 seconds minLogLikelihoodTimesPrior = -3.0079e+04 Resolution 1, iteration 159 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.016561 voxels in 0.6444 seconds minLogLikelihoodTimesPrior = -3.0082e+04 Resolution 1, iteration 160 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.034009 voxels in 0.61014 seconds minLogLikelihoodTimesPrior = -3.0087e+04 Resolution 1, iteration 161 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.042174 voxels in 0.63075 seconds minLogLikelihoodTimesPrior = -3.0094e+04 Resolution 1, iteration 162 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.071012 voxels in 0.64036 seconds minLogLikelihoodTimesPrior = -3.0104e+04 Resolution 1, iteration 163 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.047202 voxels in 1.0171 seconds minLogLikelihoodTimesPrior = -3.0111e+04 Resolution 1, iteration 164 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.10432 voxels in 0.63654 seconds minLogLikelihoodTimesPrior = -3.0115e+04 Resolution 1, iteration 165 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.07388 voxels in 0.64007 seconds minLogLikelihoodTimesPrior = -3.0118e+04 Resolution 1, iteration 166 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.045066 voxels in 0.6563 seconds minLogLikelihoodTimesPrior = -3.0124e+04 Resolution 1, iteration 167 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.059156 voxels in 0.61202 seconds minLogLikelihoodTimesPrior = -3.0132e+04 Resolution 1, iteration 168 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.086937 voxels in 0.61038 seconds minLogLikelihoodTimesPrior = -3.0143e+04 Resolution 1, iteration 169 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.11915 voxels in 0.65492 seconds minLogLikelihoodTimesPrior = -3.0162e+04 Resolution 1, iteration 170 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.040202 voxels in 1.3022 seconds minLogLikelihoodTimesPrior = -3.0169e+04 Resolution 1, iteration 171 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.064849 voxels in 0.61401 seconds minLogLikelihoodTimesPrior = -3.0182e+04 Resolution 1, iteration 172 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.078355 voxels in 0.63915 seconds minLogLikelihoodTimesPrior = -3.0200e+04 Resolution 1, iteration 173 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.036797 voxels in 1.5641 seconds minLogLikelihoodTimesPrior = -3.0208e+04 Resolution 1, iteration 174 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.062408 voxels in 0.64992 seconds minLogLikelihoodTimesPrior = -3.0221e+04 Resolution 1, iteration 175 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.15554 voxels in 0.60069 seconds minLogLikelihoodTimesPrior = -3.0238e+04 Resolution 1, iteration 176 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.041578 voxels in 1.3014 seconds minLogLikelihoodTimesPrior = -3.0240e+04 Resolution 1, iteration 177 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.01649 voxels in 0.63874 seconds minLogLikelihoodTimesPrior = -3.0244e+04 Resolution 1, iteration 178 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.015258 voxels in 0.64982 seconds minLogLikelihoodTimesPrior = -3.0246e+04 Resolution 1, iteration 179 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.031019 voxels in 0.60586 seconds minLogLikelihoodTimesPrior = -3.0249e+04 Resolution 1, iteration 180 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.062921 voxels in 0.63633 seconds minLogLikelihoodTimesPrior = -3.0253e+04 Resolution 1, iteration 181 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.062107 voxels in 0.65787 seconds minLogLikelihoodTimesPrior = -3.0258e+04 Resolution 1, iteration 182 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.11626 voxels in 0.64754 seconds minLogLikelihoodTimesPrior = -3.0264e+04 Resolution 1, iteration 183 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.060713 voxels in 0.61035 seconds minLogLikelihoodTimesPrior = -3.0271e+04 Resolution 1, iteration 184 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.060567 voxels in 0.61508 seconds minLogLikelihoodTimesPrior = -3.0283e+04 Resolution 1, iteration 185 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.06687 voxels in 0.6743 seconds minLogLikelihoodTimesPrior = -3.0290e+04 Resolution 1, iteration 186 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.059742 voxels in 0.63654 seconds minLogLikelihoodTimesPrior = -3.0299e+04 Resolution 1, iteration 187 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.018545 voxels in 2.4409 seconds minLogLikelihoodTimesPrior = -3.0299e+04 Resolution 1, iteration 188 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.00353 voxels in 0.62947 seconds minLogLikelihoodTimesPrior = -3.0300e+04 Resolution 1, iteration 189 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.01606 voxels in 0.62625 seconds minLogLikelihoodTimesPrior = -3.0301e+04 Resolution 1, iteration 190 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.018016 voxels in 0.6353 seconds minLogLikelihoodTimesPrior = -3.0303e+04 Resolution 1, iteration 191 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.040132 voxels in 0.62392 seconds minLogLikelihoodTimesPrior = -3.0306e+04 Resolution 1, iteration 192 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.063445 voxels in 0.62496 seconds minLogLikelihoodTimesPrior = -3.0310e+04 Resolution 1, iteration 193 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.063195 voxels in 0.66385 seconds minLogLikelihoodTimesPrior = -3.0315e+04 Resolution 1, iteration 194 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.11002 voxels in 0.63303 seconds minLogLikelihoodTimesPrior = -3.0321e+04 Resolution 1, iteration 195 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.11005 voxels in 0.61728 seconds minLogLikelihoodTimesPrior = -3.0330e+04 Resolution 1, iteration 196 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.11092 voxels in 0.62975 seconds minLogLikelihoodTimesPrior = -3.0341e+04 Resolution 1, iteration 197 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.095379 voxels in 0.62239 seconds minLogLikelihoodTimesPrior = -3.0355e+04 Resolution 1, iteration 198 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.04213 voxels in 1.3439 seconds minLogLikelihoodTimesPrior = -3.0360e+04 Resolution 1, iteration 199 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.072655 voxels in 0.6181 seconds minLogLikelihoodTimesPrior = -3.0368e+04 Resolution 1, iteration 200 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.12112 voxels in 0.63428 seconds minLogLikelihoodTimesPrior = -3.0380e+04 Fitting mesh to synthetic image from ASEG took 181.4703 seconds Transforming points Transforming points /home/kanel/freesurfer/bin//mri_convert /home/kanel/freesurfer/subjects/subject1/mri/orig/T2raw.mgz T2corrected.mgz $Id: mri_convert.c,v 1.222 2015/06/08 18:22:26 greve Exp $ reading from /home/kanel/freesurfer/subjects/subject1/mri/orig/T2raw.mgz... TR=8020.00, TE=50.00, TI=-1.00, flip angle=122.00 i_ras = (-0.999997, 0.00178295, 0.00183409) j_ras = (-0.00227911, -0.295551, -0.955324) k_ras = (-0.00116122, -0.955325, 0.295554) writing to T2corrected.mgz... set final LTA type to 1 INFO: dst volume info differs from the one stored in lta. gets modified now. volume geometry: extent : (206, 186, 385) voxel : ( 0.3333, 0.3333, 0.3333) x_(ras) : (-1.0000, 0.0018, 0.0018) y_(ras) : (-0.0023, -0.2956, -0.9553) z_(ras) : (-0.0012, -0.9553, 0.2956) c_(ras) : (-22.5589, -15.6930, -26.6564) file : T2isotropic.mgz volume geometry: extent : (448, 448, 24) voxel : ( 0.3906, 0.3906, 2.0000) x_(ras) : (-1.0000, 0.0018, 0.0018) y_(ras) : (-0.0023, -0.2956, -0.9553) z_(ras) : (-0.0012, -0.9553, 0.2956) c_(ras) : ( 1.5090, -9.9633, -8.0418) file : /home/kanel/freesurfer/subjects/subject1/mri/orig/T2raw.mgz threshold mask volume at 0.5 INFO: dst volume info differs from the one stored in lta. gets modified now. volume geometry: extent : (206, 186, 385) voxel : ( 0.3333, 0.3333, 0.3333) x_(ras) : (-1.0000, 0.0018, 0.0018) y_(ras) : (-0.0023, -0.2956, -0.9553) z_(ras) : (-0.0012, -0.9553, 0.2956) c_(ras) : (-22.5589, -15.6930, -26.6564) file : T2isotropic.mgz volume geometry: extent : (448, 448, 24) voxel : ( 0.3906, 0.3906, 2.0000) x_(ras) : (-1.0000, 0.0018, 0.0018) y_(ras) : (-0.0023, -0.2956, -0.9553) z_(ras) : (-0.0012, -0.9553, 0.2956) c_(ras) : ( 1.5090, -9.9633, -8.0418) file : /home/kanel/freesurfer/subjects/subject1/mri/orig/T2raw.mgz threshold mask volume at 0.5 INFO: dst volume info differs from the one stored in lta. gets modified now. volume geometry: extent : (206, 186, 385) voxel : ( 0.3333, 0.3333, 0.3333) x_(ras) : (-1.0000, 0.0018, 0.0018) y_(ras) : (-0.0023, -0.2956, -0.9553) z_(ras) : (-0.0012, -0.9553, 0.2956) c_(ras) : (-22.5589, -15.6930, -26.6564) file : T2isotropic.mgz volume geometry: extent : (448, 448, 24) voxel : ( 0.3906, 0.3906, 2.0000) x_(ras) : (-1.0000, 0.0018, 0.0018) y_(ras) : (-0.0023, -0.2956, -0.9553) z_(ras) : (-0.0012, -0.9553, 0.2956) c_(ras) : ( 1.5090, -9.9633, -8.0418) file : /home/kanel/freesurfer/subjects/subject1/mri/orig/T2raw.mgz threshold mask volume at 0.5 threshold mask volume at 0.5 Constructing image-to-world transform from header information (T1resampled.mgz) Returning the following transform: AffineTransform (0x7f3d37d2c2f0) RTTI typeinfo: itk::AffineTransform Reference Count: 1 Modified Time: 145686543 Debug: Off Observers: none Matrix: -0.333329 -0.000759697 -0.00038707 0.000594309 -0.098516 -0.318439 0.000611358 -0.318438 0.098517 Offset: [11.9192, 54.7072, -16.0692] Center: [0, 0, 0] Translation: [11.9192, 54.7072, -16.0692] Inverse: -3.00002 0.00534889 0.00550233 -0.0068374 -0.886662 -2.866 -0.0034837 -2.866 0.886671 Singular: 0 Constructing image-to-world transform from header information (/home/kanel/freesurfer/subjects/subject1/tmp/hippoSF_T1T2_v10_T2_left/imageDump.mgz) Returning the following transform: AffineTransform (0x7f3d37d2c2f0) RTTI typeinfo: itk::AffineTransform Reference Count: 1 Modified Time: 145689158 Debug: Off Observers: none Matrix: 0.301031 0.00850291 -0.0340133 -0.0254911 0.24803 -0.0430044 0.0533296 -0.0123645 0.290651 Offset: [-42.7539, -53.2105, -37.9962] Center: [0, 0, 0] Translation: [-42.7539, -53.2105, -37.9962] Inverse: 3.24911 -0.0931174 0.366447 0.232274 4.05507 0.627164 -0.586275 0.189591 3.39999 Singular: 0 Transform before cropping: AffineTransform (0x7f3d37d2c2f0) RTTI typeinfo: itk::AffineTransform Reference Count: 1 Modified Time: 145689160 Debug: Off Observers: none Matrix: -0.902943 -0.0242503 0.10341 -0.132299 -0.18454 -0.794644 0.119295 -0.721849 0.381081 Offset: [163.322, 158.903, 290.041] Center: [0, 0, 0] Translation: [163.322, 158.903, 290.041] Inverse: -1.08285 -0.109986 0.0644958 -0.0746301 -0.599378 -1.22959 0.197614 -1.10092 0.274811 Singular: 0 WorldToImageTransform before cropping: AffineTransform (0x7f3d37d65240) RTTI typeinfo: itk::AffineTransform Reference Count: 1 Modified Time: 145689162 Debug: Off Observers: none Matrix: -3.00002 0.00534889 0.00550233 -0.0068374 -0.886662 -2.866 -0.0034837 -2.866 0.886671 Offset: [35.5536, 2.53406, 171.081] Center: [0, 0, 0] Translation: [35.5536, 2.53406, 171.081] Inverse: -0.333329 -0.000759697 -0.00038707 0.000594309 -0.098516 -0.318439 0.000611358 -0.318438 0.098517 Singular: 0 m_BoundingBoxSize: [131, 241,99] minimalMappedCoordinate: [40.1196, 19.5397,116.797] maximalMappedCoordinate: [173.456, 158.903,342.895] Cropping with min [27 5 94] and max [187 173 365] m_OriginalImageRegion before checking margins: ImageRegion (0x7f3d37e8ff90) Dimension: 3 Index: [27, 5, 94] Size: [161, 169, 272] m_CroppedImageRegion before checking margins: ImageRegion (0x7f3d37e8ff58) Dimension: 3 Index: [0, 0, 0] Size: [161, 169, 272] m_OriginalImageRegion after checking margins: ImageRegion (0x7f3d37e8ff90) Dimension: 3 Index: [27, 5, 94] Size: [161, 169, 272] m_CroppedImageRegion after checking margins: ImageRegion (0x7f3d37e8ff58) Dimension: 3 Index: [0, 0, 0] Size: [161, 169, 272] Transform after cropping: AffineTransform (0x7f3d37d2c2f0) RTTI typeinfo: itk::AffineTransform Reference Count: 1 Modified Time: 145691778 Debug: Off Observers: none Matrix: -0.902943 -0.0242503 0.10341 -0.132299 -0.18454 -0.794644 0.119295 -0.721849 0.381081 Offset: [136.322, 153.903, 196.041] Center: [0, 0, 0] Translation: [136.322, 153.903, 196.041] Inverse: -1.08285 -0.109986 0.0644958 -0.0746301 -0.599378 -1.22959 0.197614 -1.10092 0.274811 Singular: 0 WorldToImageTransform after cropping: AffineTransform (0x7f3d37d65240) RTTI typeinfo: itk::AffineTransform Reference Count: 1 Modified Time: 145691779 Debug: Off Observers: none Matrix: -3.00002 0.00534889 0.00550233 -0.0068374 -0.886662 -2.866 -0.0034837 -2.866 0.886671 Offset: [8.55356, -2.46594, 77.0807] Center: [0, 0, 0] Translation: [8.55356, -2.46594, 77.0807] Inverse: -0.333329 -0.000759697 -0.00038707 0.000594309 -0.098516 -0.318439 0.000611358 -0.318438 0.098517 Singular: 0 Constructing image-to-world transform from header information (T2isotropic.mgz) Returning the following transform: AffineTransform (0x7f3d37fc9350) RTTI typeinfo: itk::AffineTransform Reference Count: 1 Modified Time: 145697078 Debug: Off Observers: none Matrix: -0.333329 -0.000759697 -0.00038707 0.000594309 -0.098516 -0.318439 0.000611358 -0.318438 0.098517 Offset: [11.9192, 54.7072, -16.0692] Center: [0, 0, 0] Translation: [11.9192, 54.7072, -16.0692] Inverse: -3.00002 0.00534889 0.00550233 -0.0068374 -0.886662 -2.866 -0.0034837 -2.866 0.886671 Singular: 0 Constructing image-to-world transform from header information (/home/kanel/freesurfer/subjects/subject1/tmp/hippoSF_T1T2_v10_T2_left/imageDump.mgz) Returning the following transform: AffineTransform (0x7f3d37fc9350) RTTI typeinfo: itk::AffineTransform Reference Count: 1 Modified Time: 145699704 Debug: Off Observers: none Matrix: 0.301031 0.00850291 -0.0340133 -0.0254911 0.24803 -0.0430044 0.0533296 -0.0123645 0.290651 Offset: [-42.7539, -53.2105, -37.9962] Center: [0, 0, 0] Translation: [-42.7539, -53.2105, -37.9962] Inverse: 3.24911 -0.0931174 0.366447 0.232274 4.05507 0.627164 -0.586275 0.189591 3.39999 Singular: 0 Transform before cropping: AffineTransform (0x7f3d37fc9350) RTTI typeinfo: itk::AffineTransform Reference Count: 1 Modified Time: 145699706 Debug: Off Observers: none Matrix: -0.902943 -0.0242503 0.10341 -0.132299 -0.18454 -0.794644 0.119295 -0.721849 0.381081 Offset: [163.322, 158.903, 290.041] Center: [0, 0, 0] Translation: [163.322, 158.903, 290.041] Inverse: -1.08285 -0.109986 0.0644958 -0.0746301 -0.599378 -1.22959 0.197614 -1.10092 0.274811 Singular: 0 WorldToImageTransform before cropping: AffineTransform (0x7f3d2c001860) RTTI typeinfo: itk::AffineTransform Reference Count: 1 Modified Time: 145699708 Debug: Off Observers: none Matrix: -3.00002 0.00534889 0.00550233 -0.0068374 -0.886662 -2.866 -0.0034837 -2.866 0.886671 Offset: [35.5536, 2.53406, 171.081] Center: [0, 0, 0] Translation: [35.5536, 2.53406, 171.081] Inverse: -0.333329 -0.000759697 -0.00038707 0.000594309 -0.098516 -0.318439 0.000611358 -0.318438 0.098517 Singular: 0 m_BoundingBoxSize: [131, 241,99] minimalMappedCoordinate: [40.1196, 19.5397,116.797] maximalMappedCoordinate: [173.456, 158.903,342.895] Cropping with min [27 5 94] and max [187 173 365] m_OriginalImageRegion before checking margins: ImageRegion (0x7f3d37feb230) Dimension: 3 Index: [27, 5, 94] Size: [161, 169, 272] m_CroppedImageRegion before checking margins: ImageRegion (0x7f3d37feb1f8) Dimension: 3 Index: [0, 0, 0] Size: [161, 169, 272] m_OriginalImageRegion after checking margins: ImageRegion (0x7f3d37feb230) Dimension: 3 Index: [27, 5, 94] Size: [161, 169, 272] m_CroppedImageRegion after checking margins: ImageRegion (0x7f3d37feb1f8) Dimension: 3 Index: [0, 0, 0] Size: [161, 169, 272] Transform after cropping: AffineTransform (0x7f3d37fc9350) RTTI typeinfo: itk::AffineTransform Reference Count: 1 Modified Time: 145702335 Debug: Off Observers: none Matrix: -0.902943 -0.0242503 0.10341 -0.132299 -0.18454 -0.794644 0.119295 -0.721849 0.381081 Offset: [136.322, 153.903, 196.041] Center: [0, 0, 0] Translation: [136.322, 153.903, 196.041] Inverse: -1.08285 -0.109986 0.0644958 -0.0746301 -0.599378 -1.22959 0.197614 -1.10092 0.274811 Singular: 0 WorldToImageTransform after cropping: AffineTransform (0x7f3d2c001860) RTTI typeinfo: itk::AffineTransform Reference Count: 1 Modified Time: 145702336 Debug: Off Observers: none Matrix: -3.00002 0.00534889 0.00550233 -0.0068374 -0.886662 -2.866 -0.0034837 -2.866 0.886671 Offset: [8.55356, -2.46594, 77.0807] Center: [0, 0, 0] Translation: [8.55356, -2.46594, 77.0807] Inverse: -0.333329 -0.000759697 -0.00038707 0.000594309 -0.098516 -0.318439 0.000611358 -0.318438 0.098517 Singular: 0 Transforming points Transforming points Reading contexts of file /home/kanel/freesurfer/average/HippoSF/atlas/compressionLookupTable.txt -------------- Making Left-Cerebral-Cortex map to reduced label 1 Making Left-Amygdala map to reduced label 1 Making subiculum map to reduced label 1 Making Hippocampal_tail map to reduced label 1 Making GC-ML-DG map to reduced label 1 Making CA4 map to reduced label 1 Making presubiculum map to reduced label 1 Making CA1 map to reduced label 1 Making parasubiculum map to reduced label 1 Making CA3 map to reduced label 1 Making HATA map to reduced label 1 -------------- Making Left-Cerebral-White-Matter map to reduced label 2 Making fimbria map to reduced label 2 -------------- Making molecular_layer_HP map to reduced label 3 -------------- Making alveus map to reduced label 4 -------------- Making hippocampal-fissure map to reduced label 5 -------------- Making Left-Lateral-Ventricle map to reduced label 6 -------------- Making Left-Pallidum map to reduced label 7 -------------- Making Left-Putamen map to reduced label 8 -------------- Making Left-Caudate map to reduced label 9 -------------- Making Left-Thalamus-Proper map to reduced label 10 -------------- Making Left-choroid-plexus map to reduced label 11 -------------- Making Left-VentralDC map to reduced label 12 -------------- Making Left-Accumbens-area map to reduced label 13 -------------- Making Unknown map to reduced label 14 Computing hyperparameters for estimation of Gaussians parameters Estimating typical intensities of molecular layer and alveus For ML in T1, we assume gray with high N In T2, we actually assume the same hypermean Smoothing mesh collection with kernel size 1.500000 ...Smoothing class: 0 Smoothing class: 1 Smoothing class: 2 Smoothing class: 3 Smoothing class: 4 Smoothing class: 5 Smoothing class: 6 Smoothing class: 7 Smoothing class: 8 Smoothing class: 9 Smoothing class: 10 Smoothing class: 11 Smoothing class: 12 Smoothing class: 13 done numberOfImages = 2 Image: 0 Image: 2 Iteration 1 of 7 1 0.0063996 2 0.0035579 3 0.0044272 4 0.0041354 5 0.0037299 6 0.0026401 7 0.001841 8 0.0040915 9 0.0026324 10 0.00091419 11 0.0021288 12 0.0067867 13 0.0041957 14 0.0032703 minLogLikelihood = 5.5827e+06 minLogLikelihood = 5.4712e+06 minLogLikelihood = 5.4530e+06 minLogLikelihood = 5.4455e+06 minLogLikelihood = 5.4409e+06 minLogLikelihood = 5.4376e+06 minLogLikelihood = 5.4358e+06 minLogLikelihood = 5.4349e+06 minLogLikelihood = 5.4343e+06 minLogLikelihood = 5.4340e+06 minLogLikelihood = 5.4339e+06 minLogLikelihood = 5.4338e+06 minLogLikelihood = 5.4337e+06 EM converged! numberOfClasses = 14 numberOfImages = 2 precisions[0][0][0] = 0.012068 precisions[0][1][0] = 0.000260 precisions[1][0][0] = 0.000260 precisions[1][1][0] = 0.000083 precisions[0][0][1] = 0.008300 precisions[0][1][1] = 0.000617 precisions[1][0][1] = 0.000617 precisions[1][1][1] = 0.000153 precisions[0][0][2] = 0.021440 precisions[0][1][2] = 0.000514 precisions[1][0][2] = 0.000514 precisions[1][1][2] = 0.000126 precisions[0][0][3] = 0.002239 precisions[0][1][3] = 0.000089 precisions[1][0][3] = 0.000089 precisions[1][1][3] = 0.000014 precisions[0][0][4] = 0.008402 precisions[0][1][4] = 0.000374 precisions[1][0][4] = 0.000374 precisions[1][1][4] = 0.000034 precisions[0][0][5] = 0.020380 precisions[0][1][5] = 0.000222 precisions[1][0][5] = 0.000222 precisions[1][1][5] = 0.000068 precisions[0][0][6] = 0.036130 precisions[0][1][6] = 0.000193 precisions[1][0][6] = 0.000193 precisions[1][1][6] = 0.000234 precisions[0][0][7] = 0.015376 precisions[0][1][7] = 0.000583 precisions[1][0][7] = 0.000583 precisions[1][1][7] = 0.000043 precisions[0][0][8] = 1.163682 precisions[0][1][8] = -0.003340 precisions[1][0][8] = -0.003340 precisions[1][1][8] = 0.000740 precisions[0][0][9] = 0.008488 precisions[0][1][9] = 0.000321 precisions[1][0][9] = 0.000321 precisions[1][1][9] = 0.000016 precisions[0][0][10] = 0.012721 precisions[0][1][10] = 0.000241 precisions[1][0][10] = 0.000241 precisions[1][1][10] = 0.000017 precisions[0][0][11] = 0.007901 precisions[0][1][11] = 0.000600 precisions[1][0][11] = 0.000600 precisions[1][1][11] = 0.000093 precisions[0][0][12] = 0.165929 precisions[0][1][12] = 0.014020 precisions[1][0][12] = 0.014020 precisions[1][1][12] = 0.001239 precisions[0][0][13] = 0.005817 precisions[0][1][13] = 0.000075 precisions[1][0][13] = 0.000075 precisions[1][1][13] = 0.000009 means[0][0] = 67.898712 means[1][0] = 661.550476 means[0][1] = 88.606071 means[1][1] = 542.164917 means[0][2] = 70.449341 means[1][2] = 627.288391 means[0][3] = 72.637352 means[1][3] = 737.598267 means[0][4] = 55.883278 means[1][4] = 765.466614 means[0][5] = 17.387081 means[1][5] = 1186.475464 means[0][6] = 95.175079 means[1][6] = 384.269562 means[0][7] = 79.101639 means[1][7] = 566.856018 means[0][8] = 73.000000 means[1][8] = 662.287109 means[0][9] = 88.090073 means[1][9] = 863.288940 means[0][10] = 38.733192 means[1][10] = 1042.093140 means[0][11] = 93.009972 means[1][11] = 523.740967 means[0][12] = 74.031395 means[1][12] = 706.622131 means[0][13] = 31.423849 means[1][13] = 821.756470 Resolution level 1 iteration 1 deformation iterations 1 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.5 voxels in 4.9277 seconds minLogLikelihoodTimesPrior = 5.4961e+06 Resolution level 1 iteration 1 deformation iterations 2 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.40136 voxels in 3.329 seconds minLogLikelihoodTimesPrior = 5.4927e+06 Resolution level 1 iteration 1 deformation iterations 3 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.12372 voxels in 6.4377 seconds minLogLikelihoodTimesPrior = 5.4912e+06 Resolution level 1 iteration 1 deformation iterations 4 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.11032 voxels in 4.6213 seconds minLogLikelihoodTimesPrior = 5.4903e+06 Resolution level 1 iteration 1 deformation iterations 5 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.1088 voxels in 2.3712 seconds minLogLikelihoodTimesPrior = 5.4887e+06 Resolution level 1 iteration 1 deformation iterations 6 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.029102 voxels in 2.4188 seconds minLogLikelihoodTimesPrior = 5.4883e+06 Resolution level 1 iteration 1 deformation iterations 7 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.11877 voxels in 2.375 seconds minLogLikelihoodTimesPrior = 5.4878e+06 Resolution level 1 iteration 1 deformation iterations 8 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.11846 voxels in 2.3615 seconds minLogLikelihoodTimesPrior = 5.4869e+06 Resolution level 1 iteration 1 deformation iterations 9 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.14887 voxels in 2.4199 seconds minLogLikelihoodTimesPrior = 5.4851e+06 Resolution level 1 iteration 1 deformation iterations 10 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.64267 voxels in 2.4063 seconds minLogLikelihoodTimesPrior = 5.4815e+06 Resolution level 1 iteration 1 deformation iterations 11 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.34398 voxels in 4.6917 seconds minLogLikelihoodTimesPrior = 5.4782e+06 Resolution level 1 iteration 1 deformation iterations 12 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.35161 voxels in 3.7909 seconds minLogLikelihoodTimesPrior = 5.4750e+06 Resolution level 1 iteration 1 deformation iterations 13 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.23167 voxels in 4.6645 seconds minLogLikelihoodTimesPrior = 5.4719e+06 Resolution level 1 iteration 1 deformation iterations 14 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.25286 voxels in 3.9307 seconds minLogLikelihoodTimesPrior = 5.4689e+06 Resolution level 1 iteration 1 deformation iterations 15 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.059426 voxels in 7.437 seconds minLogLikelihoodTimesPrior = 5.4682e+06 Resolution level 1 iteration 1 deformation iterations 16 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.099238 voxels in 2.4905 seconds minLogLikelihoodTimesPrior = 5.4670e+06 Resolution level 1 iteration 1 deformation iterations 17 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.32468 voxels in 4.7678 seconds minLogLikelihoodTimesPrior = 5.4661e+06 Resolution level 1 iteration 1 deformation iterations 18 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.1261 voxels in 2.4548 seconds minLogLikelihoodTimesPrior = 5.4642e+06 Resolution level 1 iteration 1 deformation iterations 19 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.20025 voxels in 4.8382 seconds minLogLikelihoodTimesPrior = 5.4625e+06 Resolution level 1 iteration 1 deformation iterations 20 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.28267 voxels in 2.4705 seconds minLogLikelihoodTimesPrior = 5.4590e+06 Iteration 2 of 7 minLogLikelihood = 5.4131e+06 minLogLikelihood = 5.4085e+06 minLogLikelihood = 5.4063e+06 minLogLikelihood = 5.4051e+06 minLogLikelihood = 5.4044e+06 minLogLikelihood = 5.4041e+06 minLogLikelihood = 5.4039e+06 minLogLikelihood = 5.4037e+06 minLogLikelihood = 5.4037e+06 minLogLikelihood = 5.4036e+06 EM converged! numberOfClasses = 14 numberOfImages = 2 precisions[0][0][0] = 0.012387 precisions[0][1][0] = 0.000256 precisions[1][0][0] = 0.000256 precisions[1][1][0] = 0.000083 precisions[0][0][1] = 0.008320 precisions[0][1][1] = 0.000614 precisions[1][0][1] = 0.000614 precisions[1][1][1] = 0.000153 precisions[0][0][2] = 0.021573 precisions[0][1][2] = 0.000515 precisions[1][0][2] = 0.000515 precisions[1][1][2] = 0.000128 precisions[0][0][3] = 0.002329 precisions[0][1][3] = 0.000097 precisions[1][0][3] = 0.000097 precisions[1][1][3] = 0.000014 precisions[0][0][4] = 0.008923 precisions[0][1][4] = 0.000378 precisions[1][0][4] = 0.000378 precisions[1][1][4] = 0.000034 precisions[0][0][5] = 0.020995 precisions[0][1][5] = 0.000210 precisions[1][0][5] = 0.000210 precisions[1][1][5] = 0.000068 precisions[0][0][6] = 0.036751 precisions[0][1][6] = 0.000204 precisions[1][0][6] = 0.000204 precisions[1][1][6] = 0.000237 precisions[0][0][7] = 0.014955 precisions[0][1][7] = 0.000566 precisions[1][0][7] = 0.000566 precisions[1][1][7] = 0.000042 precisions[0][0][8] = 4.389757 precisions[0][1][8] = 0.023834 precisions[1][0][8] = 0.023834 precisions[1][1][8] = 0.001858 precisions[0][0][9] = 0.009250 precisions[0][1][9] = 0.000330 precisions[1][0][9] = 0.000330 precisions[1][1][9] = 0.000016 precisions[0][0][10] = 0.012841 precisions[0][1][10] = 0.000245 precisions[1][0][10] = 0.000245 precisions[1][1][10] = 0.000018 precisions[0][0][11] = 0.009566 precisions[0][1][11] = 0.000635 precisions[1][0][11] = 0.000635 precisions[1][1][11] = 0.000097 precisions[0][0][12] = 0.381089 precisions[0][1][12] = 0.036014 precisions[1][0][12] = 0.036014 precisions[1][1][12] = 0.003464 precisions[0][0][13] = 0.005948 precisions[0][1][13] = 0.000075 precisions[1][0][13] = 0.000075 precisions[1][1][13] = 0.000009 means[0][0] = 67.867699 means[1][0] = 661.579102 means[0][1] = 88.574211 means[1][1] = 542.300476 means[0][2] = 70.445541 means[1][2] = 627.081543 means[0][3] = 72.630943 means[1][3] = 740.945251 means[0][4] = 55.886463 means[1][4] = 764.291260 means[0][5] = 17.372099 means[1][5] = 1186.798462 means[0][6] = 95.175369 means[1][6] = 384.257812 means[0][7] = 79.099800 means[1][7] = 566.867798 means[0][8] = 73.000000 means[1][8] = 661.527893 means[0][9] = 88.485420 means[1][9] = 819.690186 means[0][10] = 38.818748 means[1][10] = 1040.773315 means[0][11] = 93.569008 means[1][11] = 519.972717 means[0][12] = 74.038498 means[1][12] = 706.084351 means[0][13] = 31.428724 means[1][13] = 822.237488 Resolution level 1 iteration 2 deformation iterations 1 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.5 voxels in 7.8323 seconds minLogLikelihoodTimesPrior = 5.4531e+06 Resolution level 1 iteration 2 deformation iterations 2 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.58676 voxels in 4.4894 seconds minLogLikelihoodTimesPrior = 5.4504e+06 Resolution level 1 iteration 2 deformation iterations 3 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.67453 voxels in 2.4181 seconds minLogLikelihoodTimesPrior = 5.4455e+06 Resolution level 1 iteration 2 deformation iterations 4 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 1.1316 voxels in 2.4014 seconds minLogLikelihoodTimesPrior = 5.4371e+06 Resolution level 1 iteration 2 deformation iterations 5 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.25682 voxels in 7.4723 seconds minLogLikelihoodTimesPrior = 5.4351e+06 Resolution level 1 iteration 2 deformation iterations 6 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.54664 voxels in 3.7118 seconds minLogLikelihoodTimesPrior = 5.4332e+06 Resolution level 1 iteration 2 deformation iterations 7 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.27427 voxels in 4.7453 seconds minLogLikelihoodTimesPrior = 5.4314e+06 Resolution level 1 iteration 2 deformation iterations 8 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.50044 voxels in 2.3741 seconds minLogLikelihoodTimesPrior = 5.4280e+06 Resolution level 1 iteration 2 deformation iterations 9 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.54075 voxels in 2.7492 seconds minLogLikelihoodTimesPrior = 5.4249e+06 Resolution level 1 iteration 2 deformation iterations 10 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.22898 voxels in 2.9975 seconds minLogLikelihoodTimesPrior = 5.4234e+06 Resolution level 1 iteration 2 deformation iterations 11 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.30715 voxels in 2.3828 seconds minLogLikelihoodTimesPrior = 5.4205e+06 Resolution level 1 iteration 2 deformation iterations 12 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.30259 voxels in 2.9535 seconds minLogLikelihoodTimesPrior = 5.4178e+06 Resolution level 1 iteration 2 deformation iterations 13 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.63715 voxels in 2.5388 seconds minLogLikelihoodTimesPrior = 5.4130e+06 Resolution level 1 iteration 2 deformation iterations 14 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.85036 voxels in 2.6454 seconds minLogLikelihoodTimesPrior = 5.4122e+06 Resolution level 1 iteration 2 deformation iterations 15 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.13531 voxels in 2.541 seconds minLogLikelihoodTimesPrior = 5.4107e+06 Resolution level 1 iteration 2 deformation iterations 16 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.20264 voxels in 2.4994 seconds minLogLikelihoodTimesPrior = 5.4096e+06 Resolution level 1 iteration 2 deformation iterations 17 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.23286 voxels in 2.6559 seconds minLogLikelihoodTimesPrior = 5.4075e+06 Resolution level 1 iteration 2 deformation iterations 18 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.13927 voxels in 8.4253 seconds minLogLikelihoodTimesPrior = 5.4074e+06 Resolution level 1 iteration 2 deformation iterations 19 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.015954 voxels in 2.3807 seconds minLogLikelihoodTimesPrior = 5.4073e+06 Resolution level 1 iteration 2 deformation iterations 20 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.00091812 voxels in 2.58 seconds minLogLikelihoodTimesPrior = 5.4071e+06 Iteration 3 of 7 minLogLikelihood = 5.3706e+06 minLogLikelihood = 5.3656e+06 minLogLikelihood = 5.3637e+06 minLogLikelihood = 5.3628e+06 minLogLikelihood = 5.3624e+06 minLogLikelihood = 5.3622e+06 minLogLikelihood = 5.3620e+06 minLogLikelihood = 5.3620e+06 minLogLikelihood = 5.3619e+06 EM converged! numberOfClasses = 14 numberOfImages = 2 precisions[0][0][0] = 0.012964 precisions[0][1][0] = 0.000248 precisions[1][0][0] = 0.000248 precisions[1][1][0] = 0.000084 precisions[0][0][1] = 0.008428 precisions[0][1][1] = 0.000608 precisions[1][0][1] = 0.000608 precisions[1][1][1] = 0.000154 precisions[0][0][2] = 0.022196 precisions[0][1][2] = 0.000513 precisions[1][0][2] = 0.000513 precisions[1][1][2] = 0.000129 precisions[0][0][3] = 0.002629 precisions[0][1][3] = 0.000123 precisions[1][0][3] = 0.000123 precisions[1][1][3] = 0.000016 precisions[0][0][4] = 0.010647 precisions[0][1][4] = 0.000394 precisions[1][0][4] = 0.000394 precisions[1][1][4] = 0.000034 precisions[0][0][5] = 0.021231 precisions[0][1][5] = 0.000207 precisions[1][0][5] = 0.000207 precisions[1][1][5] = 0.000069 precisions[0][0][6] = 0.037600 precisions[0][1][6] = 0.000225 precisions[1][0][6] = 0.000225 precisions[1][1][6] = 0.000242 precisions[0][0][7] = 0.014284 precisions[0][1][7] = 0.000538 precisions[1][0][7] = 0.000538 precisions[1][1][7] = 0.000040 precisions[0][0][8] = 0.285298 precisions[0][1][8] = 0.004166 precisions[1][0][8] = 0.004166 precisions[1][1][8] = 0.001381 precisions[0][0][9] = 0.010925 precisions[0][1][9] = 0.000357 precisions[1][0][9] = 0.000357 precisions[1][1][9] = 0.000016 precisions[0][0][10] = 0.012774 precisions[0][1][10] = 0.000247 precisions[1][0][10] = 0.000247 precisions[1][1][10] = 0.000018 precisions[0][0][11] = 0.011095 precisions[0][1][11] = 0.000648 precisions[1][0][11] = 0.000648 precisions[1][1][11] = 0.000102 precisions[0][0][12] = 0.553436 precisions[0][1][12] = 0.052401 precisions[1][0][12] = 0.052401 precisions[1][1][12] = 0.005021 precisions[0][0][13] = 0.006068 precisions[0][1][13] = 0.000075 precisions[1][0][13] = 0.000075 precisions[1][1][13] = 0.000009 means[0][0] = 67.801262 means[1][0] = 661.703674 means[0][1] = 88.520462 means[1][1] = 542.544739 means[0][2] = 70.406250 means[1][2] = 626.866699 means[0][3] = 72.693695 means[1][3] = 747.756531 means[0][4] = 55.889496 means[1][4] = 761.821533 means[0][5] = 17.366030 means[1][5] = 1186.864746 means[0][6] = 95.175339 means[1][6] = 384.229126 means[0][7] = 79.093811 means[1][7] = 566.929688 means[0][8] = 73.000000 means[1][8] = 662.290100 means[0][9] = 88.917564 means[1][9] = 770.707397 means[0][10] = 38.903839 means[1][10] = 1039.689697 means[0][11] = 94.035378 means[1][11] = 516.514038 means[0][12] = 74.048683 means[1][12] = 705.387146 means[0][13] = 31.470791 means[1][13] = 822.237183 Resolution level 1 iteration 3 deformation iterations 1 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 1 voxels in 5.0829 seconds minLogLikelihoodTimesPrior = 5.4049e+06 Resolution level 1 iteration 3 deformation iterations 2 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.882 voxels in 2.6463 seconds minLogLikelihoodTimesPrior = 5.4043e+06 Resolution level 1 iteration 3 deformation iterations 3 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.38444 voxels in 2.4796 seconds minLogLikelihoodTimesPrior = 5.4038e+06 Resolution level 1 iteration 3 deformation iterations 4 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.2159 voxels in 2.7356 seconds minLogLikelihoodTimesPrior = 5.4035e+06 Resolution level 1 iteration 3 deformation iterations 5 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.16758 voxels in 2.4246 seconds minLogLikelihoodTimesPrior = 5.4032e+06 Resolution level 1 iteration 3 deformation iterations 6 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.24828 voxels in 2.543 seconds minLogLikelihoodTimesPrior = 5.4027e+06 Resolution level 1 iteration 3 deformation iterations 7 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.26524 voxels in 2.3472 seconds minLogLikelihoodTimesPrior = 5.4017e+06 Resolution level 1 iteration 3 deformation iterations 8 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.43933 voxels in 2.4008 seconds minLogLikelihoodTimesPrior = 5.4002e+06 Resolution level 1 iteration 3 deformation iterations 9 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.714 voxels in 2.3973 seconds minLogLikelihoodTimesPrior = 5.3985e+06 Resolution level 1 iteration 3 deformation iterations 10 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.015192 voxels in 12.0115 seconds minLogLikelihoodTimesPrior = 5.3985e+06 Resolution level 1 iteration 3 deformation iterations 11 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.0029337 voxels in 2.6277 seconds minLogLikelihoodTimesPrior = 5.3984e+06 Resolution level 1 iteration 3 deformation iterations 12 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.0027237 voxels in 2.3836 seconds minLogLikelihoodTimesPrior = 5.3983e+06 Resolution level 1 iteration 3 deformation iterations 13 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.019621 voxels in 2.4616 seconds minLogLikelihoodTimesPrior = 5.3982e+06 Resolution level 1 iteration 3 deformation iterations 14 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.0021624 voxels in 2.3807 seconds minLogLikelihoodTimesPrior = 5.3981e+06 Resolution level 1 iteration 3 deformation iterations 15 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.0054061 voxels in 2.4695 seconds minLogLikelihoodTimesPrior = 5.3980e+06 Resolution level 1 iteration 3 deformation iterations 16 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.08679 voxels in 2.329 seconds minLogLikelihoodTimesPrior = 5.3979e+06 Resolution level 1 iteration 3 deformation iterations 17 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.013064 voxels in 2.3795 seconds minLogLikelihoodTimesPrior = 5.3978e+06 Resolution level 1 iteration 3 deformation iterations 18 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.022918 voxels in 9.0837 seconds minLogLikelihoodTimesPrior = 5.3978e+06 Resolution level 1 iteration 3 deformation iterations 19 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.00089298 voxels in 2.3374 seconds minLogLikelihoodTimesPrior = 5.3978e+06 Resolution level 1 iteration 3 deformation iterations 20 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.0094407 voxels in 2.4936 seconds minLogLikelihoodTimesPrior = 5.3978e+06 Iteration 4 of 7 minLogLikelihood = 5.3573e+06 minLogLikelihood = 5.3564e+06 minLogLikelihood = 5.3560e+06 minLogLikelihood = 5.3559e+06 minLogLikelihood = 5.3558e+06 minLogLikelihood = 5.3558e+06 EM converged! numberOfClasses = 14 numberOfImages = 2 precisions[0][0][0] = 0.013074 precisions[0][1][0] = 0.000245 precisions[1][0][0] = 0.000245 precisions[1][1][0] = 0.000084 precisions[0][0][1] = 0.008444 precisions[0][1][1] = 0.000606 precisions[1][0][1] = 0.000606 precisions[1][1][1] = 0.000154 precisions[0][0][2] = 0.022430 precisions[0][1][2] = 0.000512 precisions[1][0][2] = 0.000512 precisions[1][1][2] = 0.000128 precisions[0][0][3] = 0.002919 precisions[0][1][3] = 0.000146 precisions[1][0][3] = 0.000146 precisions[1][1][3] = 0.000017 precisions[0][0][4] = 0.011168 precisions[0][1][4] = 0.000393 precisions[1][0][4] = 0.000393 precisions[1][1][4] = 0.000033 precisions[0][0][5] = 0.021297 precisions[0][1][5] = 0.000207 precisions[1][0][5] = 0.000207 precisions[1][1][5] = 0.000069 precisions[0][0][6] = 0.037640 precisions[0][1][6] = 0.000227 precisions[1][0][6] = 0.000227 precisions[1][1][6] = 0.000242 precisions[0][0][7] = 0.014157 precisions[0][1][7] = 0.000533 precisions[1][0][7] = 0.000533 precisions[1][1][7] = 0.000039 precisions[0][0][8] = 0.949198 precisions[0][1][8] = 0.009370 precisions[1][0][8] = 0.009370 precisions[1][1][8] = 0.001609 precisions[0][0][9] = 0.011231 precisions[0][1][9] = 0.000360 precisions[1][0][9] = 0.000360 precisions[1][1][9] = 0.000016 precisions[0][0][10] = 0.012763 precisions[0][1][10] = 0.000247 precisions[1][0][10] = 0.000247 precisions[1][1][10] = 0.000018 precisions[0][0][11] = 0.011305 precisions[0][1][11] = 0.000650 precisions[1][0][11] = 0.000650 precisions[1][1][11] = 0.000103 precisions[0][0][12] = 0.568841 precisions[0][1][12] = 0.053827 precisions[1][0][12] = 0.053827 precisions[1][1][12] = 0.005153 precisions[0][0][13] = 0.006056 precisions[0][1][13] = 0.000075 precisions[1][0][13] = 0.000075 precisions[1][1][13] = 0.000009 means[0][0] = 67.796288 means[1][0] = 661.668396 means[0][1] = 88.511147 means[1][1] = 542.527161 means[0][2] = 70.390244 means[1][2] = 626.890991 means[0][3] = 72.761398 means[1][3] = 751.807922 means[0][4] = 55.890888 means[1][4] = 761.229553 means[0][5] = 17.364290 means[1][5] = 1186.853760 means[0][6] = 95.174973 means[1][6] = 384.219574 means[0][7] = 79.092781 means[1][7] = 566.943481 means[0][8] = 73.000000 means[1][8] = 661.765686 means[0][9] = 88.992058 means[1][9] = 760.696960 means[0][10] = 38.907417 means[1][10] = 1038.425537 means[0][11] = 94.104355 means[1][11] = 515.980225 means[0][12] = 74.050240 means[1][12] = 705.316711 means[0][13] = 31.505440 means[1][13] = 821.885803 Resolution level 1 iteration 4 deformation iterations 1 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.5 voxels in 5.8071 seconds minLogLikelihoodTimesPrior = 5.3976e+06 Resolution level 1 iteration 4 deformation iterations 2 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.15886 voxels in 2.6483 seconds minLogLikelihoodTimesPrior = 5.3974e+06 Resolution level 1 iteration 4 deformation iterations 3 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.18131 voxels in 2.4416 seconds minLogLikelihoodTimesPrior = 5.3971e+06 Resolution level 1 iteration 4 deformation iterations 4 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.51923 voxels in 2.6079 seconds minLogLikelihoodTimesPrior = 5.3967e+06 Resolution level 1 iteration 4 deformation iterations 5 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.19466 voxels in 2.8284 seconds minLogLikelihoodTimesPrior = 5.3963e+06 Resolution level 1 iteration 4 deformation iterations 6 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.26341 voxels in 4.7573 seconds minLogLikelihoodTimesPrior = 5.3962e+06 Resolution level 1 iteration 4 deformation iterations 7 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.037018 voxels in 2.4189 seconds minLogLikelihoodTimesPrior = 5.3961e+06 Resolution level 1 iteration 4 deformation iterations 8 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.062611 voxels in 2.3924 seconds minLogLikelihoodTimesPrior = 5.3959e+06 Resolution level 1 iteration 4 deformation iterations 9 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.15535 voxels in 2.4707 seconds minLogLikelihoodTimesPrior = 5.3956e+06 Resolution level 1 iteration 4 deformation iterations 10 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.15597 voxels in 2.39 seconds minLogLikelihoodTimesPrior = 5.3949e+06 Resolution level 1 iteration 4 deformation iterations 11 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.17947 voxels in 2.4075 seconds minLogLikelihoodTimesPrior = 5.3936e+06 Resolution level 1 iteration 4 deformation iterations 12 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.16986 voxels in 2.5814 seconds minLogLikelihoodTimesPrior = 5.3924e+06 Resolution level 1 iteration 4 deformation iterations 13 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.53242 voxels in 2.4485 seconds minLogLikelihoodTimesPrior = 5.3901e+06 Resolution level 1 iteration 4 deformation iterations 14 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.18295 voxels in 5.0953 seconds minLogLikelihoodTimesPrior = 5.3896e+06 Resolution level 1 iteration 4 deformation iterations 15 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.20395 voxels in 2.5881 seconds minLogLikelihoodTimesPrior = 5.3891e+06 Resolution level 1 iteration 4 deformation iterations 16 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.20645 voxels in 2.5307 seconds minLogLikelihoodTimesPrior = 5.3882e+06 Resolution level 1 iteration 4 deformation iterations 17 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.46357 voxels in 2.3255 seconds minLogLikelihoodTimesPrior = 5.3864e+06 Resolution level 1 iteration 4 deformation iterations 18 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.56428 voxels in 2.7082 seconds minLogLikelihoodTimesPrior = 5.3849e+06 Resolution level 1 iteration 4 deformation iterations 19 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.71161 voxels in 2.3951 seconds minLogLikelihoodTimesPrior = 5.3825e+06 Resolution level 1 iteration 4 deformation iterations 20 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.28228 voxels in 5.2889 seconds minLogLikelihoodTimesPrior = 5.3818e+06 Iteration 5 of 7 minLogLikelihood = 5.3447e+06 minLogLikelihood = 5.3432e+06 minLogLikelihood = 5.3427e+06 minLogLikelihood = 5.3425e+06 minLogLikelihood = 5.3425e+06 minLogLikelihood = 5.3424e+06 EM converged! numberOfClasses = 14 numberOfImages = 2 precisions[0][0][0] = 0.013342 precisions[0][1][0] = 0.000239 precisions[1][0][0] = 0.000239 precisions[1][1][0] = 0.000085 precisions[0][0][1] = 0.008493 precisions[0][1][1] = 0.000601 precisions[1][0][1] = 0.000601 precisions[1][1][1] = 0.000153 precisions[0][0][2] = 0.023320 precisions[0][1][2] = 0.000504 precisions[1][0][2] = 0.000504 precisions[1][1][2] = 0.000125 precisions[0][0][3] = 0.003709 precisions[0][1][3] = 0.000206 precisions[1][0][3] = 0.000206 precisions[1][1][3] = 0.000021 precisions[0][0][4] = 0.012032 precisions[0][1][4] = 0.000379 precisions[1][0][4] = 0.000379 precisions[1][1][4] = 0.000032 precisions[0][0][5] = 0.021502 precisions[0][1][5] = 0.000207 precisions[1][0][5] = 0.000207 precisions[1][1][5] = 0.000069 precisions[0][0][6] = 0.037790 precisions[0][1][6] = 0.000238 precisions[1][0][6] = 0.000238 precisions[1][1][6] = 0.000242 precisions[0][0][7] = 0.013990 precisions[0][1][7] = 0.000525 precisions[1][0][7] = 0.000525 precisions[1][1][7] = 0.000038 precisions[0][0][8] = 2.877877 precisions[0][1][8] = 0.049359 precisions[1][0][8] = 0.049359 precisions[1][1][8] = 0.002151 precisions[0][0][9] = 0.011786 precisions[0][1][9] = 0.000368 precisions[1][0][9] = 0.000368 precisions[1][1][9] = 0.000016 precisions[0][0][10] = 0.012812 precisions[0][1][10] = 0.000249 precisions[1][0][10] = 0.000249 precisions[1][1][10] = 0.000018 precisions[0][0][11] = 0.011665 precisions[0][1][11] = 0.000651 precisions[1][0][11] = 0.000651 precisions[1][1][11] = 0.000105 precisions[0][0][12] = 0.512031 precisions[0][1][12] = 0.048100 precisions[1][0][12] = 0.048100 precisions[1][1][12] = 0.004578 precisions[0][0][13] = 0.006032 precisions[0][1][13] = 0.000075 precisions[1][0][13] = 0.000075 precisions[1][1][13] = 0.000009 means[0][0] = 67.787857 means[1][0] = 661.576538 means[0][1] = 88.477211 means[1][1] = 542.510010 means[0][2] = 70.323936 means[1][2] = 627.167847 means[0][3] = 72.920868 means[1][3] = 759.659424 means[0][4] = 55.889595 means[1][4] = 760.217285 means[0][5] = 17.358437 means[1][5] = 1186.843628 means[0][6] = 95.172997 means[1][6] = 384.185608 means[0][7] = 79.089020 means[1][7] = 566.981812 means[0][8] = 73.000000 means[1][8] = 660.992981 means[0][9] = 89.110336 means[1][9] = 744.158813 means[0][10] = 38.878231 means[1][10] = 1036.743164 means[0][11] = 94.239487 means[1][11] = 514.983765 means[0][12] = 74.051628 means[1][12] = 705.231323 means[0][13] = 31.578979 means[1][13] = 821.192383 Resolution level 1 iteration 5 deformation iterations 1 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 1 voxels in 4.7698 seconds minLogLikelihoodTimesPrior = 5.3814e+06 Resolution level 1 iteration 5 deformation iterations 2 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.3173 voxels in 2.4895 seconds minLogLikelihoodTimesPrior = 5.3810e+06 Resolution level 1 iteration 5 deformation iterations 3 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.70062 voxels in 2.3508 seconds minLogLikelihoodTimesPrior = 5.3804e+06 Resolution level 1 iteration 5 deformation iterations 4 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.4108 voxels in 3.1298 seconds minLogLikelihoodTimesPrior = 5.3799e+06 Resolution level 1 iteration 5 deformation iterations 5 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.11477 voxels in 5.1603 seconds minLogLikelihoodTimesPrior = 5.3797e+06 Resolution level 1 iteration 5 deformation iterations 6 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.29788 voxels in 4.7202 seconds minLogLikelihoodTimesPrior = 5.3796e+06 Resolution level 1 iteration 5 deformation iterations 7 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.1336 voxels in 2.7458 seconds minLogLikelihoodTimesPrior = 5.3796e+06 Resolution level 1 iteration 5 deformation iterations 8 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.16911 voxels in 2.4327 seconds minLogLikelihoodTimesPrior = 5.3794e+06 Resolution level 1 iteration 5 deformation iterations 9 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.14279 voxels in 2.3593 seconds minLogLikelihoodTimesPrior = 5.3791e+06 Resolution level 1 iteration 5 deformation iterations 10 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.12486 voxels in 2.3852 seconds minLogLikelihoodTimesPrior = 5.3785e+06 Resolution level 1 iteration 5 deformation iterations 11 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.23574 voxels in 2.6158 seconds minLogLikelihoodTimesPrior = 5.3782e+06 Resolution level 1 iteration 5 deformation iterations 12 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.21666 voxels in 2.3672 seconds minLogLikelihoodTimesPrior = 5.3777e+06 Resolution level 1 iteration 5 deformation iterations 13 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.038016 voxels in 2.3746 seconds minLogLikelihoodTimesPrior = 5.3775e+06 Resolution level 1 iteration 5 deformation iterations 14 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.12769 voxels in 4.1584 seconds minLogLikelihoodTimesPrior = 5.3775e+06 Resolution level 1 iteration 5 deformation iterations 15 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.092638 voxels in 2.4866 seconds minLogLikelihoodTimesPrior = 5.3774e+06 Resolution level 1 iteration 5 deformation iterations 16 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.068054 voxels in 2.3808 seconds minLogLikelihoodTimesPrior = 5.3774e+06 Resolution level 1 iteration 5 deformation iterations 17 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.10684 voxels in 2.3851 seconds minLogLikelihoodTimesPrior = 5.3772e+06 Resolution level 1 iteration 5 deformation iterations 18 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.14787 voxels in 2.3529 seconds minLogLikelihoodTimesPrior = 5.3769e+06 Resolution level 1 iteration 5 deformation iterations 19 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.21526 voxels in 2.3417 seconds minLogLikelihoodTimesPrior = 5.3766e+06 Resolution level 1 iteration 5 deformation iterations 20 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.1998 voxels in 2.4355 seconds minLogLikelihoodTimesPrior = 5.3759e+06 Iteration 6 of 7 minLogLikelihood = 5.3387e+06 minLogLikelihood = 5.3381e+06 minLogLikelihood = 5.3380e+06 minLogLikelihood = 5.3379e+06 minLogLikelihood = 5.3379e+06 EM converged! numberOfClasses = 14 numberOfImages = 2 precisions[0][0][0] = 0.013452 precisions[0][1][0] = 0.000236 precisions[1][0][0] = 0.000236 precisions[1][1][0] = 0.000086 precisions[0][0][1] = 0.008519 precisions[0][1][1] = 0.000599 precisions[1][0][1] = 0.000599 precisions[1][1][1] = 0.000153 precisions[0][0][2] = 0.023996 precisions[0][1][2] = 0.000494 precisions[1][0][2] = 0.000494 precisions[1][1][2] = 0.000123 precisions[0][0][3] = 0.004313 precisions[0][1][3] = 0.000248 precisions[1][0][3] = 0.000248 precisions[1][1][3] = 0.000024 precisions[0][0][4] = 0.012511 precisions[0][1][4] = 0.000371 precisions[1][0][4] = 0.000371 precisions[1][1][4] = 0.000031 precisions[0][0][5] = 0.021578 precisions[0][1][5] = 0.000210 precisions[1][0][5] = 0.000210 precisions[1][1][5] = 0.000068 precisions[0][0][6] = 0.037823 precisions[0][1][6] = 0.000243 precisions[1][0][6] = 0.000243 precisions[1][1][6] = 0.000242 precisions[0][0][7] = 0.013918 precisions[0][1][7] = 0.000522 precisions[1][0][7] = 0.000522 precisions[1][1][7] = 0.000038 precisions[0][0][8] = 5.052787 precisions[0][1][8] = 0.083989 precisions[1][0][8] = 0.083989 precisions[1][1][8] = 0.003113 precisions[0][0][9] = 0.012007 precisions[0][1][9] = 0.000371 precisions[1][0][9] = 0.000371 precisions[1][1][9] = 0.000016 precisions[0][0][10] = 0.012854 precisions[0][1][10] = 0.000251 precisions[1][0][10] = 0.000251 precisions[1][1][10] = 0.000018 precisions[0][0][11] = 0.011759 precisions[0][1][11] = 0.000651 precisions[1][0][11] = 0.000651 precisions[1][1][11] = 0.000106 precisions[0][0][12] = 0.487545 precisions[0][1][12] = 0.045536 precisions[1][0][12] = 0.045536 precisions[1][1][12] = 0.004312 precisions[0][0][13] = 0.006005 precisions[0][1][13] = 0.000075 precisions[1][0][13] = 0.000075 precisions[1][1][13] = 0.000009 means[0][0] = 67.791435 means[1][0] = 661.468384 means[0][1] = 88.474846 means[1][1] = 542.416199 means[0][2] = 70.284615 means[1][2] = 627.394226 means[0][3] = 73.053101 means[1][3] = 763.580200 means[0][4] = 55.888741 means[1][4] = 759.779724 means[0][5] = 17.356358 means[1][5] = 1186.788940 means[0][6] = 95.171265 means[1][6] = 384.163116 means[0][7] = 79.087524 means[1][7] = 566.996521 means[0][8] = 73.000000 means[1][8] = 661.069580 means[0][9] = 89.155609 means[1][9] = 737.514160 means[0][10] = 38.863369 means[1][10] = 1035.408447 means[0][11] = 94.284828 means[1][11] = 514.653137 means[0][12] = 74.051697 means[1][12] = 705.238403 means[0][13] = 31.624289 means[1][13] = 820.859070 Resolution level 1 iteration 6 deformation iterations 1 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.5 voxels in 5.0846 seconds minLogLikelihoodTimesPrior = 5.3757e+06 Resolution level 1 iteration 6 deformation iterations 2 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.092966 voxels in 5.2772 seconds minLogLikelihoodTimesPrior = 5.3757e+06 Resolution level 1 iteration 6 deformation iterations 3 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.052304 voxels in 2.4379 seconds minLogLikelihoodTimesPrior = 5.3757e+06 Resolution level 1 iteration 6 deformation iterations 4 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.28938 voxels in 2.4079 seconds minLogLikelihoodTimesPrior = 5.3756e+06 Resolution level 1 iteration 6 deformation iterations 5 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.32003 voxels in 2.3493 seconds minLogLikelihoodTimesPrior = 5.3755e+06 Resolution level 1 iteration 6 deformation iterations 6 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.091032 voxels in 2.3398 seconds minLogLikelihoodTimesPrior = 5.3754e+06 Resolution level 1 iteration 6 deformation iterations 7 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.28693 voxels in 2.3445 seconds minLogLikelihoodTimesPrior = 5.3753e+06 Resolution level 1 iteration 6 deformation iterations 8 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.2555 voxels in 2.4625 seconds minLogLikelihoodTimesPrior = 5.3752e+06 Resolution level 1 iteration 6 deformation iterations 9 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.16296 voxels in 2.4076 seconds minLogLikelihoodTimesPrior = 5.3750e+06 Resolution level 1 iteration 6 deformation iterations 10 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.1923 voxels in 2.4416 seconds minLogLikelihoodTimesPrior = 5.3748e+06 Resolution level 1 iteration 6 deformation iterations 11 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.18733 voxels in 2.6161 seconds minLogLikelihoodTimesPrior = 5.3747e+06 Resolution level 1 iteration 6 deformation iterations 12 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.15775 voxels in 2.3499 seconds minLogLikelihoodTimesPrior = 5.3745e+06 Resolution level 1 iteration 6 deformation iterations 13 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.017587 voxels in 14.7546 seconds minLogLikelihoodTimesPrior = 5.3744e+06 Resolution level 1 iteration 6 deformation iterations 14 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.0044959 voxels in 2.3819 seconds minLogLikelihoodTimesPrior = 5.3744e+06 Resolution level 1 iteration 6 deformation iterations 15 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.01041 voxels in 9.6688 seconds minLogLikelihoodTimesPrior = 5.3744e+06 Resolution level 1 iteration 6 deformation iterations 16 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.00040783 voxels in 2.4485 seconds minLogLikelihoodTimesPrior = 5.3744e+06 Resolution level 1 iteration 6 deformation iterations 17 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.0050737 voxels in 4.741 seconds minLogLikelihoodTimesPrior = 5.3744e+06 Resolution level 1 iteration 6 deformation iterations 18 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.00036783 voxels in 2.4559 seconds minLogLikelihoodTimesPrior = 5.3744e+06 Resolution level 1 iteration 6 deformation iterations 19 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.001255 voxels in 14.6678 seconds minLogLikelihoodTimesPrior = 5.3744e+06 Resolution level 1 iteration 6 deformation iterations 20 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 2.5615e-05 voxels in 2.3685 seconds minLogLikelihoodTimesPrior = 5.3744e+06 Iteration 7 of 7 minLogLikelihood = 5.3368e+06 minLogLikelihood = 5.3366e+06 minLogLikelihood = 5.3365e+06 minLogLikelihood = 5.3365e+06 EM converged! numberOfClasses = 14 numberOfImages = 2 precisions[0][0][0] = 0.013485 precisions[0][1][0] = 0.000235 precisions[1][0][0] = 0.000235 precisions[1][1][0] = 0.000086 precisions[0][0][1] = 0.008524 precisions[0][1][1] = 0.000598 precisions[1][0][1] = 0.000598 precisions[1][1][1] = 0.000153 precisions[0][0][2] = 0.024348 precisions[0][1][2] = 0.000491 precisions[1][0][2] = 0.000491 precisions[1][1][2] = 0.000122 precisions[0][0][3] = 0.004504 precisions[0][1][3] = 0.000260 precisions[1][0][3] = 0.000260 precisions[1][1][3] = 0.000024 precisions[0][0][4] = 0.012737 precisions[0][1][4] = 0.000369 precisions[1][0][4] = 0.000369 precisions[1][1][4] = 0.000031 precisions[0][0][5] = 0.021603 precisions[0][1][5] = 0.000211 precisions[1][0][5] = 0.000211 precisions[1][1][5] = 0.000068 precisions[0][0][6] = 0.037834 precisions[0][1][6] = 0.000245 precisions[1][0][6] = 0.000245 precisions[1][1][6] = 0.000242 precisions[0][0][7] = 0.013876 precisions[0][1][7] = 0.000521 precisions[1][0][7] = 0.000521 precisions[1][1][7] = 0.000038 precisions[0][0][8] = 7.518508 precisions[0][1][8] = 0.098309 precisions[1][0][8] = 0.098309 precisions[1][1][8] = 0.003432 precisions[0][0][9] = 0.012085 precisions[0][1][9] = 0.000372 precisions[1][0][9] = 0.000372 precisions[1][1][9] = 0.000016 precisions[0][0][10] = 0.012889 precisions[0][1][10] = 0.000253 precisions[1][0][10] = 0.000253 precisions[1][1][10] = 0.000018 precisions[0][0][11] = 0.011780 precisions[0][1][11] = 0.000651 precisions[1][0][11] = 0.000651 precisions[1][1][11] = 0.000106 precisions[0][0][12] = 0.475211 precisions[0][1][12] = 0.044213 precisions[1][0][12] = 0.044213 precisions[1][1][12] = 0.004173 precisions[0][0][13] = 0.005992 precisions[0][1][13] = 0.000075 precisions[1][0][13] = 0.000075 precisions[1][1][13] = 0.000009 means[0][0] = 67.795769 means[1][0] = 661.428894 means[0][1] = 88.475594 means[1][1] = 542.373352 means[0][2] = 70.270622 means[1][2] = 627.486938 means[0][3] = 73.101158 means[1][3] = 764.789062 means[0][4] = 55.888474 means[1][4] = 759.580933 means[0][5] = 17.355913 means[1][5] = 1186.752075 means[0][6] = 95.170570 means[1][6] = 384.157227 means[0][7] = 79.087135 means[1][7] = 567.000916 means[0][8] = 73.000000 means[1][8] = 661.375854 means[0][9] = 89.170395 means[1][9] = 735.315613 means[0][10] = 38.862179 means[1][10] = 1034.749756 means[0][11] = 94.298164 means[1][11] = 514.556946 means[0][12] = 74.051910 means[1][12] = 705.233948 means[0][13] = 31.641495 means[1][13] = 820.762573 Resolution level 1 iteration 7 deformation iterations 1 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.5 voxels in 7.1528 seconds minLogLikelihoodTimesPrior = 5.3744e+06 Resolution level 1 iteration 7 deformation iterations 2 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.010849 voxels in 2.3398 seconds minLogLikelihoodTimesPrior = 5.3744e+06 Resolution level 1 iteration 7 deformation iterations 3 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.057985 voxels in 2.4688 seconds minLogLikelihoodTimesPrior = 5.3744e+06 Resolution level 1 iteration 7 deformation iterations 4 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.039356 voxels in 2.6339 seconds minLogLikelihoodTimesPrior = 5.3744e+06 Resolution level 1 iteration 7 deformation iterations 5 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.16759 voxels in 2.4374 seconds minLogLikelihoodTimesPrior = 5.3743e+06 Resolution level 1 iteration 7 deformation iterations 6 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.10189 voxels in 2.5353 seconds minLogLikelihoodTimesPrior = 5.3741e+06 Resolution level 1 iteration 7 deformation iterations 7 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.24646 voxels in 2.3808 seconds minLogLikelihoodTimesPrior = 5.3741e+06 Resolution level 1 iteration 7 deformation iterations 8 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.027678 voxels in 2.4738 seconds minLogLikelihoodTimesPrior = 5.3740e+06 Resolution level 1 iteration 7 deformation iterations 9 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.0056515 voxels in 16.6391 seconds minLogLikelihoodTimesPrior = 5.3740e+06 Resolution level 1 iteration 7 deformation iterations 10 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.00016511 voxels in 2.3361 seconds minLogLikelihoodTimesPrior = 5.3740e+06 Resolution level 1 iteration 7 deformation iterations 11 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.0039902 voxels in 2.3492 seconds minLogLikelihoodTimesPrior = 5.3740e+06 Resolution level 1 iteration 7 deformation iterations 12 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 4.7888e-05 voxels in 2.3612 seconds minLogLikelihoodTimesPrior = 5.3740e+06 Resolution level 1 iteration 7 deformation iterations 13 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 5.0052e-05 voxels in 2.568 seconds minLogLikelihoodTimesPrior = 5.3740e+06 Resolution level 1 iteration 7 deformation iterations 14 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.0021992 voxels in 2.6173 seconds minLogLikelihoodTimesPrior = 5.3740e+06 Resolution level 1 iteration 7 deformation iterations 15 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.00019908 voxels in 2.3647 seconds minLogLikelihoodTimesPrior = 5.3740e+06 Resolution level 1 iteration 7 deformation iterations 16 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.00040439 voxels in 2.4222 seconds minLogLikelihoodTimesPrior = 5.3740e+06 Resolution level 1 iteration 7 deformation iterations 17 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.015584 voxels in 2.5542 seconds minLogLikelihoodTimesPrior = 5.3740e+06 Resolution level 1 iteration 7 deformation iterations 18 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.0018321 voxels in 2.5551 seconds minLogLikelihoodTimesPrior = 5.3740e+06 Resolution level 1 iteration 7 deformation iterations 19 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.058369 voxels in 2.4409 seconds minLogLikelihoodTimesPrior = 5.3739e+06 Resolution level 1 iteration 7 deformation iterations 20 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.006691 voxels in 2.3582 seconds minLogLikelihoodTimesPrior = 5.3739e+06 Smoothing mesh collection with kernel size 0.750000 ...Smoothing class: 0 Smoothing class: 1 Smoothing class: 2 Smoothing class: 3 Smoothing class: 4 Smoothing class: 5 Smoothing class: 6 Smoothing class: 7 Smoothing class: 8 Smoothing class: 9 Smoothing class: 10 Smoothing class: 11 Smoothing class: 12 Smoothing class: 13 done numberOfImages = 2 Image: 0 Image: 2 Iteration 1 of 5 minLogLikelihood = 5.3358e+06 minLogLikelihood = 5.3369e+06 EM converged! numberOfClasses = 14 numberOfImages = 2 precisions[0][0][0] = 0.013201 precisions[0][1][0] = 0.000238 precisions[1][0][0] = 0.000238 precisions[1][1][0] = 0.000084 precisions[0][0][1] = 0.008357 precisions[0][1][1] = 0.000595 precisions[1][0][1] = 0.000595 precisions[1][1][1] = 0.000151 precisions[0][0][2] = 0.023222 precisions[0][1][2] = 0.000448 precisions[1][0][2] = 0.000448 precisions[1][1][2] = 0.000118 precisions[0][0][3] = 0.004470 precisions[0][1][3] = 0.000259 precisions[1][0][3] = 0.000259 precisions[1][1][3] = 0.000024 precisions[0][0][4] = 0.012774 precisions[0][1][4] = 0.000382 precisions[1][0][4] = 0.000382 precisions[1][1][4] = 0.000031 precisions[0][0][5] = 0.021513 precisions[0][1][5] = 0.000214 precisions[1][0][5] = 0.000214 precisions[1][1][5] = 0.000068 precisions[0][0][6] = 0.037283 precisions[0][1][6] = 0.000252 precisions[1][0][6] = 0.000252 precisions[1][1][6] = 0.000237 precisions[0][0][7] = 0.013829 precisions[0][1][7] = 0.000531 precisions[1][0][7] = 0.000531 precisions[1][1][7] = 0.000039 precisions[0][0][8] = 9.860659 precisions[0][1][8] = 0.093841 precisions[1][0][8] = 0.093841 precisions[1][1][8] = 0.003157 precisions[0][0][9] = 0.011720 precisions[0][1][9] = 0.000366 precisions[1][0][9] = 0.000366 precisions[1][1][9] = 0.000016 precisions[0][0][10] = 0.012576 precisions[0][1][10] = 0.000250 precisions[1][0][10] = 0.000250 precisions[1][1][10] = 0.000018 precisions[0][0][11] = 0.011542 precisions[0][1][11] = 0.000646 precisions[1][0][11] = 0.000646 precisions[1][1][11] = 0.000105 precisions[0][0][12] = 0.494656 precisions[0][1][12] = 0.046230 precisions[1][0][12] = 0.046230 precisions[1][1][12] = 0.004379 precisions[0][0][13] = 0.005908 precisions[0][1][13] = 0.000074 precisions[1][0][13] = 0.000074 precisions[1][1][13] = 0.000009 means[0][0] = 67.803619 means[1][0] = 661.252747 means[0][1] = 88.365555 means[1][1] = 543.010498 means[0][2] = 70.293930 means[1][2] = 627.606750 means[0][3] = 72.943474 means[1][3] = 767.581482 means[0][4] = 55.883495 means[1][4] = 761.107178 means[0][5] = 17.356377 means[1][5] = 1186.726440 means[0][6] = 95.165199 means[1][6] = 384.084259 means[0][7] = 79.102310 means[1][7] = 566.785522 means[0][8] = 73.000000 means[1][8] = 661.482056 means[0][9] = 89.105339 means[1][9] = 745.531433 means[0][10] = 38.858322 means[1][10] = 1033.231812 means[0][11] = 94.242477 means[1][11] = 514.964539 means[0][12] = 74.038277 means[1][12] = 705.623779 means[0][13] = 31.626806 means[1][13] = 821.070007 Resolution level 2 iteration 1 deformation iterations 1 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.5 voxels in 7.5255 seconds minLogLikelihoodTimesPrior = 5.3734e+06 Resolution level 2 iteration 1 deformation iterations 2 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.0060278 voxels in 2.4453 seconds minLogLikelihoodTimesPrior = 5.3734e+06 Resolution level 2 iteration 1 deformation iterations 3 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.042944 voxels in 2.3967 seconds minLogLikelihoodTimesPrior = 5.3733e+06 Resolution level 2 iteration 1 deformation iterations 4 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.028592 voxels in 2.3613 seconds minLogLikelihoodTimesPrior = 5.3733e+06 Resolution level 2 iteration 1 deformation iterations 5 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.11624 voxels in 7.6742 seconds minLogLikelihoodTimesPrior = 5.3733e+06 Resolution level 2 iteration 1 deformation iterations 6 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.0075614 voxels in 2.3601 seconds minLogLikelihoodTimesPrior = 5.3733e+06 Resolution level 2 iteration 1 deformation iterations 7 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.019345 voxels in 2.4405 seconds minLogLikelihoodTimesPrior = 5.3733e+06 Resolution level 2 iteration 1 deformation iterations 8 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.015934 voxels in 2.4545 seconds minLogLikelihoodTimesPrior = 5.3732e+06 Resolution level 2 iteration 1 deformation iterations 9 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.11741 voxels in 2.3894 seconds minLogLikelihoodTimesPrior = 5.3732e+06 Resolution level 2 iteration 1 deformation iterations 10 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.083806 voxels in 2.377 seconds minLogLikelihoodTimesPrior = 5.3731e+06 Resolution level 2 iteration 1 deformation iterations 11 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.18398 voxels in 2.361 seconds minLogLikelihoodTimesPrior = 5.3729e+06 Resolution level 2 iteration 1 deformation iterations 12 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.19109 voxels in 2.3702 seconds minLogLikelihoodTimesPrior = 5.3725e+06 Resolution level 2 iteration 1 deformation iterations 13 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.452 voxels in 2.3359 seconds minLogLikelihoodTimesPrior = 5.3719e+06 Resolution level 2 iteration 1 deformation iterations 14 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.56675 voxels in 2.385 seconds minLogLikelihoodTimesPrior = 5.3712e+06 Resolution level 2 iteration 1 deformation iterations 15 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.45378 voxels in 2.3317 seconds minLogLikelihoodTimesPrior = 5.3700e+06 Resolution level 2 iteration 1 deformation iterations 16 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.10254 voxels in 2.9983 seconds minLogLikelihoodTimesPrior = 5.3698e+06 Resolution level 2 iteration 1 deformation iterations 17 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.27888 voxels in 2.4633 seconds minLogLikelihoodTimesPrior = 5.3694e+06 Resolution level 2 iteration 1 deformation iterations 18 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.2961 voxels in 2.5596 seconds minLogLikelihoodTimesPrior = 5.3689e+06 Resolution level 2 iteration 1 deformation iterations 19 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.18199 voxels in 2.9773 seconds minLogLikelihoodTimesPrior = 5.3685e+06 Resolution level 2 iteration 1 deformation iterations 20 Number of Meshes: 1 Using CG optimizer Did one deformation step of max. 0.40141 voxels in 2.36 seconds minLogLikelihoodTimesPrior = 5.3679e+06 Iteration 2 of 5 minLogLikelihood = 5.3269e+06 minLogLikelihood = 5.3261e+06 minLogLikelihood = 5.3258e+06 minLogLikelihood = -5.3524e+13 + 8.0896e+02i EM converged! numberOfClasses = 14 numberOfImages = 2 precisions[0][0][0] = 0.013380 precisions[0][1][0] = 0.000242 precisions[1][0][0] = 0.000242 precisions[1][1][0] = 0.000085 precisions[0][0][1] = 0.008372 precisions[0][1][1] = 0.000595 precisions[1][0][1] = 0.000595 precisions[1][1][1] = 0.000151 precisions[0][0][2] = 0.022811 precisions[0][1][2] = 0.000410 precisions[1][0][2] = 0.000410 precisions[1][1][2] = 0.000116 precisions[0][0][3] = 0.004701 precisions[0][1][3] = 0.000275 precisions[1][0][3] = 0.000275 precisions[1][1][3] = 0.000025 precisions[0][0][4] = 0.013362 precisions[0][1][4] = 0.000388 precisions[1][0][4] = 0.000388 precisions[1][1][4] = 0.000031 precisions[0][0][5] = 0.021373 precisions[0][1][5] = 0.000217 precisions[1][0][5] = 0.000217 precisions[1][1][5] = 0.000068 precisions[0][0][6] = 0.037097 precisions[0][1][6] = 0.000252 precisions[1][0][6] = 0.000252 precisions[1][1][6] = 0.000236 precisions[0][0][7] = 0.014018 precisions[0][1][7] = 0.000538 precisions[1][0][7] = 0.000538 precisions[1][1][7] = 0.000039 precisions[0][0][8] = -4503599627370496.000000 precisions[0][1][8] = 4503599627370496.000000 precisions[1][0][8] = 4503599627370496.000000 precisions[1][1][8] = -4081.000000 precisions[0][0][9] = 0.011880 precisions[0][1][9] = 0.000367 precisions[1][0][9] = 0.000367 precisions[1][1][9] = 0.000016 precisions[0][0][10] = 0.012386 precisions[0][1][10] = 0.000249 precisions[1][0][10] = 0.000249 precisions[1][1][10] = 0.000018 precisions[0][0][11] = 0.011626 precisions[0][1][11] = 0.000646 precisions[1][0][11] = 0.000646 precisions[1][1][11] = 0.000106 precisions[0][0][12] = 0.543687 precisions[0][1][12] = 0.051516 precisions[1][0][12] = 0.051516 precisions[1][1][12] = 0.004941 precisions[0][0][13] = 0.005861 precisions[0][1][13] = 0.000074 precisions[1][0][13] = 0.000074 precisions[1][1][13] = 0.000009 means[0][0] = 67.845551 means[1][0] = 661.187805 means[0][1] = 88.345444 means[1][1] = 543.100952 means[0][2] = 70.252426 means[1][2] = 627.830078 means[0][3] = 73.039841 means[1][3] = 769.414673 means[0][4] = 55.882336 means[1][4] = 760.589050 means[0][5] = 17.358421 means[1][5] = 1186.634155 means[0][6] = 95.164993 means[1][6] = 384.088135 means[0][7] = 79.102043 means[1][7] = 566.769287 means[0][8] = 73.000000 means[1][8] = 0.000000 means[0][9] = 89.160835 means[1][9] = 737.033508 means[0][10] = 38.837044 means[1][10] = 1033.730103 means[0][11] = 94.281357 means[1][11] = 514.756104 means[0][12] = 74.036270 means[1][12] = 705.530457 means[0][13] = 31.699907 means[1][13] = 820.493835 Resolution level 2 iteration 2 deformation iterations 1 Number of Meshes: 1 Using CG optimizer