Ok, if you also send me the first file, /media/Data/Temple/Temple_Tracula/31313422_10128/dmri/ dwi.ecclog, I'll see if I can replicate the error.
From: freesurfer-bounces@nmr.mgh.harvard.edu [freesurfer-bounces@nmr.mgh.harvard.edu ] on behalf of Katherine Damme [katherine.damme@gmail.com]
Sent: Tuesday, December 13, 2016 9:21 AM
To: Freesurfer support list
Subject: Re: [Freesurfer] Tracula Set: No Match
Yes. I immediately tried to enter the command in manually, checked the paths, and looked at the command manual for any format errors.
[ksd770@katelinux Temple_Tracula]$ xfmrot /media/Data/Temple/Temple_
Tracula/31313422_10128/dmri/ dwi.ecclog /media/Data/Temple/Temple_ Tracula/31313422_10128/dmri/ bvecs.norot /media/Data/Temple/Temple_ Tracula/31313422_10128/dmri/ bvecs set: No match.
On Wed, Dec 7, 2016 at 2:41 PM, Yendiki, Anastasia <AYENDIKI@mgh.harvard.edu> wrote:
Thanks. This looks fine. When you run that xfmrot command directly on the linux command line, do you get the same error?
From: freesurfer-bounces@nmr.mgh.harvard.edu [freesurfer-bounces@nmr.mgh.harvard.edu ] on behalf of Katherine Damme [katherine.damme@gmail.com]
Sent: Wednesday, December 07, 2016 12:41 PM
To: Freesurfer support list
Subject: Re: [Freesurfer] Tracula Set: No Match
On Mon, Dec 5, 2016 at 12:00 PM, Yendiki, Anastasia <AYENDIKI@mgh.harvard.edu> wrote:
Hi Katherine - The error occurs when processing this file:
/media/Data/Temple/Temple_Tracula/31313422_10128/dmri/bvecs. norot
Can you send this file? Thanks!
a.y
From: Katherine Damme [katherine.damme@gmail.com]
Sent: Saturday, December 03, 2016 3:42 PM
To: Freesurfer support list; Anastasia Yendiki
Subject: Tracula Set: No Match
Hello!
I have been getting a "set: No match." error. I haven't been able to sort out what is causing it.
Attached you will find the configuration file, command, and log files associated with this error.
"mv -f /media/Data/Temple/Temple_Tracula/31313422_10128/dmri/bvecs /media/Data/Temple/Temple_Trac ula/31313422_10128/dmri/bvecs. norot xfmrot /media/Data/Temple/Temple_Tracula/31313422_10128/dmri/dwi.ec clog /media/Data/Temple/Temple_Trac ula/31313422_10128/dmri/bvecs. norot /media/Data/Temple/Temple_Trac ula/31313422_10128/dmri/bvecs set: No match."
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/ freesurfer
The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.