I emailed the other day about hyperintensity after running motioncor. We've skipped motioncor in our processing now, but we keep getting this error while running AR2.
\n mri_ca_register -invert-and-save transforms/talairach.m3z \n
mri passed volume size is different from the one used to create M3D data
Loading, Inverting, Saving, Exiting ...
Reading transforms/talairach.m3z
gunzip -c transforms/talairach.m3z
Inverting GCAM
ERROR: mri_ca_register with non-zero status 0
Darwin
cerebrum.uwm.edu 10.8.0 Darwin Kernel Version 10.8.0: Tue Jun 7 16:33:36 PDT 2011; root:xnu-1504.15.3~1/RELEASE_I386 i386
recon-all -s freesurfer exited with ERRORS at Wed Jun 5 19:32:56 CDT 2013
I tried rerunning recon-all -s freesurfer -talairach before running AR2, and that didn't fix the error. What's going wrong?
Thanks,
Erin Browning