ok thanks.

On Wed, Feb 10, 2016 at 3:40 PM, Bruce Fischl <fischl@nmr.mgh.harvard.edu> wrote:

not to my knowledge, but others may have developed something
Bruce
On Wed, 10 Feb
2016, Corinna Bauer wrote:

> Thanks, Bruce.
> In an earlier thread from '09 with a similar problem(https://mail.nmr.mgh.harvard.edu/pipermail/freesurfer/2009-May/010554.html
> ), it was mentioned that there was a method being developed to edit the
> surface mesh. Is that option still available and would it help? Since this
> step in our analysis stream is central to everything else, we are willing to
> try whatever it takes.
>
> Corinna
>
> On Wed, Feb 10, 2016 at 12:19 PM, Bruce Fischl <fischl@nmr.mgh.harvard.edu>
> wrote:
>       Sorry Corinna
>
>       I meant to answer this the first time but it slipped through the
>       cracks.
>       I doubt there is much you can do if there is that big a lesion.
>       If the
>       topology is wrong and you can't see tissue in those regions it's
>       going to
>       be very hard
>       Bruce
>
>
>       On Wed, 10 Feb 2016,
>       Corinna Bauer wrote:
>
>       > Dear Experts,
>       >
>       > I have a subject with severe atrophy in bilateral frontal and
>       parietal
>       > regions and after many rounds of edits to the brainmask,
>       wm.mgz, and control
>       > points, these regions are still left uncaptured. Is there a
>       way to edit the
>       > pial surface to include these grey matter regions? I am
>       hesitant to draw
>       > them in via the wm surface since there is no definite WM
>       present.
>       >
>       > I do have a FLAIR also on this subject.
>       >
>       > I've attached a couple examples.
>       >
>       > Thanks!
>       >
>       > Corinna
>       >
>       >
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