External Email - Use Caution        

Hi Rosie,

I'm going to have to defer to others about questions on manual editing.. I've never done it!

Sorry,

-Paul 

On Thu, Jul 8, 2021 at 1:27 PM Rosalia Dacosta Aguayo <rdacostaa@gmail.com> wrote:

        External Email - Use Caution        

Hi Paul,

Not sure what command I should run when I edit the brainmask because the pial got too much.

Kind regards,
Rosie




On Thu, Jul 8, 2021 at 6:13 PM Paul Wighton <paul@corticometrics.com> wrote:

        External Email - Use Caution        

Hi Rosie,
 
It is my first time editing wm segmentation (white matter segmentation errors + topological errors).

I wonder if there is a good tutorial on which I could rely.



Also, I have read there is an example of segmentation that comes with FreeSurfer that is called Bert. I think it would be great to have it so I can look at it as a good example.

There should be an example that comes with the FreeSurfer installation.  I can't remember exactly what comes with v6, but you should find more info with `cat $FREESURFER_HOME/subjects/README`

Good luck!

-Paul
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer