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Hello FreeSurfer Developers,

I'm attempting to create a head model with T1w by creating tetrahedral head mesh with the simnibs program (documentation_2.0.1_preprocessing_scripts.pdf). I want to simulate the effects of transcranial magnetic stimulations with the T1 of my subjects. When i run the mri2mesh command, which use some of the freesurfer commands, i get the following error with freesurfer :
 
ncvarput: ncid 5: Protocol error
miicv_put: MINC package entry point
nu_estimate_np_and_em: crashed while running mincmath (termination status=768)
nu_correct: crashed while running nu_estimate_np_and_em (termination status=768)
ERROR: nu_correct
Linux neurodebian 3.16.0-4-amd64 #1 SMP Debian 3.16.7-ckt9-3~deb8u1 (2015-04-24) x86_64 GNU/Linux
I've searched the list and no similar errors have been reported. Does anyone have any thoughts on how to trouble-shoot this one? Also, Ive attached the recon-all.log for two of my subjects in which i've encountered the error in case it's of any use. 
I've seen a couple of messages reporting this error in the mail archives but couldn't find any answer to correct this problem. 
Thank you in advance for your help !


Francis Houde
Étudiant au doctorat en sciences des radiations et imagerie biomédicale
Centre de recherche sur le vieillissement (Université de Sherbrooke) 
(819) 780-2220 # 45423
CIUSSS de l'Estrie CHUS

1036, rue Belvédère Sud - local 3441

Sherbrooke (Québec)   J1H 4C4