Hello Bruce,

I am referring to link
http://surfer.nmr.mgh.harvard.edu/fswiki/VolumeRoiCorticalThickness

to calculate the cortical thickness of particular area such as Left hippocampus for our own data set.

But i am looking for forward to generate lh.thickness file in freesurfer for own data set which can be used as overlay. (Used for surface to surface overlay)

Can u suggest how to generate lh.thickness file for my own data using freesurfer...?

cheers