Thanks Doug!<br><br>However, now I&#39;m getting the following error:<br><br><i>Resampling<br>Output registration matrix is identity<br><br>mri_vol2vol done<br>ERROR: canot find norm</i><br><br>I am running:<br><br><i>xhemireg --s fsaverage --reg</i><br>
<br>Any suggestions? Should I run the following from $SUBJECTS_DIR/fsaverage/mri/?<br><br>mri_nu_correct.mni --i orig.mgz --o nu.mgz --n 2 --uchar transforms/talairach.xfm<br>mri_ca_normalize -mask brainmask.mgz nu.mgz $FREESURFER_HOME/average/RB_all_2008-03-26.gca transforms/talairach.lta norm.mgz <br>
<br>Andrew<br><br><br><div class="gmail_quote">On Mon, Oct 1, 2012 at 8:32 PM, Douglas Greve <span dir="ltr">&lt;<a href="mailto:greve@nmr.mgh.harvard.edu" target="_blank">greve@nmr.mgh.harvard.edu</a>&gt;</span> wrote:<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
  
    
  
  <div bgcolor="#FFFFFF" text="#000000">
    <br>
    I just put a new version here:<br>
    <br>
<a href="ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/mri_vol2vol" target="_blank">ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/mri_vol2vol</a><br>
    <br>
    doug<div><div class="h5"><br>
    <br>
    <br>
    <div>On 10/1/12 10:56 PM, Andrew Bock wrote:<br>
    </div>
    </div></div><blockquote type="cite"><div><div class="h5">Hello,<br>
      <br>
      I&#39;m having a problem similar to the one outlined here: <a href="https://mail.nmr.mgh.harvard.edu/pipermail/freesurfer/2012-June/024182.html" target="_blank">https://mail.nmr.mgh.harvard.edu/pipermail/freesurfer/2012-June/024182.html</a><br>

      <br>
      When I run xhemireg I receive the error &quot;ERROR: Option
      --keep-precision unknown&quot;<br>
      <br>
      I looked for the newer version of mri_vol2vol described in the
      previous post, but could not find it on the ftp site.  Any
      suggestions?<br>
      <br>
      Andrew<br clear="all">
      <br>
      <br>
      <br>
      <fieldset></fieldset>
      <br>
      </div></div><pre>_______________________________________________
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