Thank you Bruce for you answer, but i still have the doubt, is motion correction from the FSL the method to average the images? or is another method... I wrote motion correction cuz in the -help of recon-all says that theyr made in the same step, but not to be the same process. but whatever is not explain which is the averaging method, even when i look in the  FS page, it appears the mri_average, but has no methodology explained.

Best
Gabriel

 


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