Hello FreeSurfer Developers,
Command:
recon-all -s subject -hippocampal-subfields-T1
Error:
recon-all -s TNU_AIDAZ_3002_T1 exited with ERRORS at Mon Jun 22 15:42:08 JST 2020
(TNU_AIDAZ_3002_T1 is the subject name)
Does anyone have any thoughts on how to trouble-shoot this one? Also, Ive attached the recon-all.log in case it's of any use.
Here are few contexts:
a) I had the following command for recon-all for my subject:
recon-all -i ${SUBJECTS_DIR}/subject_structual_image_file.nii -s subject -all -qcache -3T
b) this was done without an error
c) now I want to do "
recon-all -s subject -hippocampal-subfields-T1"
1) FreeSurfer version: freesurfer-Linux-centos6_x86_64-stable-pub-v5.3.0
2) Platform: CentOS release 6.7 (Final)
3) recon-all.log: see attached