Hi Doug,
I've attached the output from running fieldsign-sess.
Thanks for all your help.
Michelle
Michelle, before you do that, can you run the offending program with -debug and send me the (copious) terminal output? Your anat should not have to be re-run.
doug
Michelle Umali wrote:
Hi Bruce,
Will this undo my wm and pial edits?
Thanks.
Michelle
------------------------------------------------------------------------On Sat, Oct 1, 2011 at 3:37 PM, Bruce Fischl <fischl@nmr.mgh.harvard.edu <mailto:fischl@nmr.mgh.harvard.edu>> wrote:
try running
recon-all -s subject -make all
and leave the -dontrun off. It should bring everything up to date
Bruce
On Sat, 1 Oct 2011, Michelle Umali wrote:
Dear Freesurfers,
I'm still getting a MRISripZeros() and MRIScopyMRI Surf/src
mismatch error
when running fieldsign-sess. You suggested that this problem
was due to the
surfaces being out of synch. When I ran recon-all -s subject
-make all
-dontrun, I saw that several steps had not run. The data
looked alright and
the number of vertices matched when I ran -vno-check.
The mismatch error is still occurring, and I don't know how to
proceed.
Please suggest steps that I should take.
Thanks.
Michelle
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Douglas N. Greve, Ph.D.
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